AT3G61200.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Thioesterase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G04290.1); Has 296 Blast hits to 296 proteins in 69 species: Archae - 1; Bacteria - 37; Metazoa - 61; Fungi - 14; Plants - 161; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:22657599..22658350 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 20475.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.78 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.09 | ||||||||||||||||||||||||||||||||
| Length | 188 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNWAKFRETG SPEDTDMSST PISSDTTAVS KVIDPNYVLM VADFFKAISP DESCNDFTSF DSFSVLFQNN TRALSIARGR VSCSVTVTPG ISNFFKGLHG 101: GAVASIAERV AMACVKTVVS EDKHLFIGEL SMSYLSSAPI SSELLVEGTV VRTGRNLSVV TVEFKIKETM KVTYLSRATF YHSPISKL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)