ATMG01320.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : NADH dehydrogenase 2B | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from two precursors, NAD2A and NAD2B. | ||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
NADH dehydrogenase 2B (NAD2B); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain N (InterPro:IPR010096), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 2A (TAIR:ATMG00285.1). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chrM:-:327890..333105 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 54883.10 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.16 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.73 | ||||||||||||||||||||||||||||||||||||||||
Length | 499 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MKAEFVRILP HMFNLFLAVS PEIFIINATS ILLIHGVVFS TSKKYDYPPL ASNVGWLGLL SVLITLLLLA AGAPLLTIAH LFWNNLFRRD NFTYFCQIFL 101: LLSTAGTISM CFDSSDQERF DAFEFIVLIP LPTRGMLFMI SAHDLIAMYL AIEPQSLCFY VIAASKRKSE FSTEAGSKYL ILGAFSSGIL LFGCSMIYGS 201: TGATHFDQLA KILTGYEITG ARSSGIFMGI LSIAVGFLFK ITAVPFHMWA PDIYEGSPTP VTAFLSIAPK ISISANILRV SIYGSYGATL QQIFFFCSIA 301: SMILGALAAM AQTKVKRPLA HSSIGHVGYI RTGFSCGTIE GIQSLLIGIF IYALMTMDAF AIVSALRQTR VKYIADLGAL AKTNPISAIT FSITMFSYAG 401: IPPLAGFCSK FYLFFAALGC GAYFLAPVGV VTSVIGRFYY IRLVKRMFFD TPRTWILYEP MDRNKSLLLA MTSFFITSSL LYPSPLFSVT HQMALSSYL |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)