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ATMG01320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : NADH dehydrogenase 2B
Curator
Summary (TAIR10)
encodes subunit of mitochondrial NAD(P)H dehydrogenase that is trans-spliced from two precursors, NAD2A and NAD2B.
Computational
Description (TAIR10)
NADH dehydrogenase 2B (NAD2B); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain N (InterPro:IPR010096), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH dehydrogenase 2A (TAIR:ATMG00285.1).
Protein Annotations
eggNOG:COG1007eggNOG:ENOG410IPMVEMBL:JF729200EMBL:JF729202
EnsemblPlants:ATMG00285.1EnsemblPlants:ATMG01320EnsemblPlants:ATMG01320.1entrez:3371312
GeneID:3371312GO:GO:0005739GO:GO:0008137GO:GO:0016021
GO:GO:0042773Gramene:ATMG00285.1Gramene:ATMG01320.1gramene_pathway:1.6.5.3
gramene_pathway:PWY-3781gramene_pathway:PWY-4302gramene_pathway:PWY-5083HAMAP:MF_00445
hmmpanther:PTHR22773hmmpanther:PTHR22773:SF89InterPro:IPR001750InterPro:IPR010096
KEGG:ath:ArthMp026KO:K03879OMA:NIFIAKLPfam:PF00361
RefSeq:NP_085584.1STRING:3702.ATMG01320.1tair10-symbols:NAD2tair10-symbols:NAD2.2
tair10-symbols:NAD2BTIGRfam:TIGR01770TIGRFAMs:TIGR01770TMHMM:TMhelix
UniProt:G1C2Q1
Coordinates (TAIR10) chrM:-:327890..333105
Molecular Weight (calculated) 54883.10 Da
IEP (calculated) 9.16
GRAVY (calculated) 0.73
Length 499 amino acids
Sequence (TAIR10)
(BLAST)
001: MKAEFVRILP HMFNLFLAVS PEIFIINATS ILLIHGVVFS TSKKYDYPPL ASNVGWLGLL SVLITLLLLA AGAPLLTIAH LFWNNLFRRD NFTYFCQIFL
101: LLSTAGTISM CFDSSDQERF DAFEFIVLIP LPTRGMLFMI SAHDLIAMYL AIEPQSLCFY VIAASKRKSE FSTEAGSKYL ILGAFSSGIL LFGCSMIYGS
201: TGATHFDQLA KILTGYEITG ARSSGIFMGI LSIAVGFLFK ITAVPFHMWA PDIYEGSPTP VTAFLSIAPK ISISANILRV SIYGSYGATL QQIFFFCSIA
301: SMILGALAAM AQTKVKRPLA HSSIGHVGYI RTGFSCGTIE GIQSLLIGIF IYALMTMDAF AIVSALRQTR VKYIADLGAL AKTNPISAIT FSITMFSYAG
401: IPPLAGFCSK FYLFFAALGC GAYFLAPVGV VTSVIGRFYY IRLVKRMFFD TPRTWILYEP MDRNKSLLLA MTSFFITSSL LYPSPLFSVT HQMALSSYL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)