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AT2G23093.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.965
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Major facilitator superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G49310.1); Has 365 Blast hits to 362 proteins in 119 species: Archae - 0; Bacteria - 86; Metazoa - 79; Fungi - 33; Plants - 127; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XSP5eggNOG:KOG4332EMBL:AK118240EMBL:BT006100
EMBL:CP002685EnsemblPlants:AT2G23093EnsemblPlants:AT2G23093.1entrez:816840
GeneID:816840GO:GO:0015098GO:GO:0016021Gramene:AT2G23093.1
hmmpanther:PTHR23516hmmpanther:PTHR23516:SF2HOGENOM:HOG000006014InterPro:IPR008509
InterPro:IPR020846KEGG:ath:AT2G23093OMA:AVFWILWPfam:PF05631
PhylomeDB:Q8GXH4Proteomes:UP000006548RefSeq:NP_850037.1SUPFAM:SSF103473
TAIR:AT2G23093TMHMM:TMhelixUniGene:At.48508UniProt:Q8GXH4
Coordinates (TAIR10) chr2:+:9832193..9834416
Molecular Weight (calculated) 50407.10 Da
IEP (calculated) 7.70
GRAVY (calculated) 0.63
Length 449 amino acids
Sequence (TAIR10)
(BLAST)
001: MGVVIETFIW EPSSSFFIFF FVSTFLSISL FPYLAKNRTF GSFDHSISSS FARFQRWFLA IYTLSSVMEG LLSVYGELEL TTYGLSKESM VFYLCVGYST
101: ALVLGPVLGV VSDLIGQKKI CLLYCVLHLI VGVWKRITMS PSAWFANVFL SLAGLVYSFG FETWLVVEHE KQSQRNDSLN ETFWLMTFLE SASLIGGQVL
201: ANWLVGENVQ DGIALSATAS LLLSVVTIIC IVQTAKEPLK TLPFRDYSTA FYAYVLGDKR IWFLGTSQAC LQFSTAVFWI LWAPTIVADG REVNLGLIYP
301: CFLGSRMLGS TVFPWLMSGQ SLLRLEDCLV YIYALLGIVF SIVAYDYQEI RILVVLFCLF HGFAGLALPL LARLRTMYVP NELRGGMISL SQVPANAAIL
401: FFLIQRGYSN KIENSTMMAL GAISLFTASG CIYMLRRWGK SPHHDWHKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)