AT2G23093.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.965 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Major facilitator superfamily protein | ||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G49310.1); Has 365 Blast hits to 362 proteins in 119 species: Archae - 0; Bacteria - 86; Metazoa - 79; Fungi - 33; Plants - 127; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). | ||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:+:9832193..9834416 | ||||||||||||||||||||||||||||
Molecular Weight (calculated) | 50407.10 Da | ||||||||||||||||||||||||||||
IEP (calculated) | 7.70 | ||||||||||||||||||||||||||||
GRAVY (calculated) | 0.63 | ||||||||||||||||||||||||||||
Length | 449 amino acids | ||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MGVVIETFIW EPSSSFFIFF FVSTFLSISL FPYLAKNRTF GSFDHSISSS FARFQRWFLA IYTLSSVMEG LLSVYGELEL TTYGLSKESM VFYLCVGYST 101: ALVLGPVLGV VSDLIGQKKI CLLYCVLHLI VGVWKRITMS PSAWFANVFL SLAGLVYSFG FETWLVVEHE KQSQRNDSLN ETFWLMTFLE SASLIGGQVL 201: ANWLVGENVQ DGIALSATAS LLLSVVTIIC IVQTAKEPLK TLPFRDYSTA FYAYVLGDKR IWFLGTSQAC LQFSTAVFWI LWAPTIVADG REVNLGLIYP 301: CFLGSRMLGS TVFPWLMSGQ SLLRLEDCLV YIYALLGIVF SIVAYDYQEI RILVVLFCLF HGFAGLALPL LARLRTMYVP NELRGGMISL SQVPANAAIL 401: FFLIQRGYSN KIENSTMMAL GAISLFTASG CIYMLRRWGK SPHHDWHKL |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)