AT4G17910.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : transferases, transferring acyl groups | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
transferases, transferring acyl groups; FUNCTIONS IN: transferase activity, transferring acyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: GWT1 (InterPro:IPR009447); Has 62 Blast hits to 62 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 21; Plants - 15; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:9951322..9953689 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48522.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.60 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.62 | ||||||||||||||||||||||||||||||||||||||||
| Length | 434 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTFLLFQLLV LLRYSIGFHC KIDNNGVKSV TSKKNDDEKI VISRNWKAAI SLDFIFIVFP MLLFFTVLSE WVYHGTGLLS LLVLILSVTA KRSFSGLQRG 101: QSLSFRASVS SYRVALMLIT CLCILAVDFT IFPRRYAKTE TYGTSLMDLG VGSFVLANAV VSRQARDVSS GNWITGIKAT APLLLLGFIR LVTTSGVDYQ 201: VHVTEYGVHW NFFFTLAAIS ILTSFVNIPA KYCGLLGFAV LAGYQTWLLS GLNTYLLSDE RGTDIISKNK EGVYSILGYW GMYLLGVHLG YRLFYGKHTN 301: IRSTTSSIAR VFLVSLLLWI VTILFDNYVE RISRRTCNMP YVTWVLAQDL QALGIFMLSS YIPLNKLSSL EEAIDQNLLA TFLLANLVTG MVNLTVDTIF 401: ASPFSSLLIL TAYAFALSAI IGTIHFSGFR LKFW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)