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AT4G31600.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22933714 (2012): Golgi Golgi apparatus Golgi membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : UDP-N-acetylglucosamine (UAA) transporter family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
UDP-N-acetylglucosamine (UAA) transporter family; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT4G32272.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5070eggNOG:KOG1444EMBL:AY042818EMBL:AY064629
EMBL:CP002687EnsemblPlants:AT4G31600EnsemblPlants:AT4G31600.1entrez:829287
ExpressionAtlas:Q94B65GeneID:829287GO:GO:0005459GO:GO:0005460
GO:GO:0005794GO:GO:0015785GO:GO:0015786GO:GO:0016021
GO:GO:0048527GO:GO:0072334GO:GO:0080147Gramene:AT4G31600.1
hmmpanther:PTHR11132hmmpanther:PTHR11132:SF47HOGENOM:HOG000241726IntAct:Q94B65
InterPro:IPR004853OMA:WAFPGWKPfam:PF03151PhylomeDB:Q94B65
Proteomes:UP000006548RefSeq:NP_567879.1STRING:3702.AT4G31600.1TAIR:AT4G31600
TMHMM:TMhelixUniGene:At.2366UniProt:Q94B65
Coordinates (TAIR10) chr4:-:15315232..15316909
Molecular Weight (calculated) 34627.50 Da
IEP (calculated) 9.75
GRAVY (calculated) 0.81
Length 323 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVQAEMEPT SSISLVAAVS YGIASMAMVF INKAVIMQYP HSMTVLTLQQ LATSLLIHFG RRMGYTRAKG IDMATAKKLL PVSIFYNANV AFALASLKGV
101: NIPMYIAIKR LTPLAVLISG VLFGKGKPTT QVALSVLLTA AGCVIAALGD FSFDLFGYGL ALTSVFFQTM YLVLVEKSGA EDGLSSIEIM FYNSFLSLPF
201: LSILIIVTGE FPNSLSLLLA KCSYLPFLVI LILSLVMGIV LNFTMFLCTI VNSALTTTIV GVLKGVGSTT LGFVLLGGVE VHALNVSGLV VNTAGGVWYS
301: YAKYRQKKAK PAKLMSDLEA HKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)