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AT5G38460.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.590
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ALG6, ALG8 glycosyltransferase family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ALG6, ALG8 glycosyltransferase family; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; LOCATED IN: endoplasmic reticulum membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG6/ALG8 (InterPro:IPR004856); BEST Arabidopsis thaliana protein match is: ALG6, ALG8 glycosyltransferase family (TAIR:AT2G44660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G38460-MONOMERBioCyc:ARA:GQT-136-MONOMERCAZy:GT57EC:2.4.1.267
eggNOG:ENOG410XQK1eggNOG:KOG2575EMBL:AB005248EMBL:AY035066
EMBL:AY056364EMBL:CP002688EnsemblPlants:AT5G38460EnsemblPlants:AT5G38460.1
EnsemblPlants:AT5G38460.2entrez:833834GeneID:833834Genevisible:Q9FF17
GO:GO:0005789GO:GO:0006486GO:GO:0016021GO:GO:0016758
Gramene:AT5G38460.1Gramene:AT5G38460.2hmmpanther:PTHR12413hmmpanther:PTHR12413:SF1
HOGENOM:HOG000195048InParanoid:Q9FF17InterPro:IPR004856KEGG:ath:AT5G38460
KO:K03848OMA:TTMAFFIPANTHER:PTHR12413PaxDb:Q9FF17
Pfam:PF03155Pfam:Q9FF17PhylomeDB:Q9FF17PRIDE:Q9FF17
PRO:PR:Q9FF17ProteinModelPortal:Q9FF17Proteomes:UP000006548Reactome:R-ATH-446193
RefSeq:NP_001190434.1RefSeq:NP_198662.1STRING:3702.AT5G38460.1TAIR:AT5G38460
TMHMM:TMhelixUniGene:At.7253UniPathway:UPA00378UniProt:Q9FF17
Coordinates (TAIR10) chr5:-:15398592..15400987
Molecular Weight (calculated) 61115.90 Da
IEP (calculated) 9.01
GRAVY (calculated) 0.38
Length 533 amino acids
Sequence (TAIR10)
(BLAST)
001: MPKKKPAKHS GEDDITIPVS PQTGSSIDTW WWLTHKGTTT SFLCISLFAL LIRSAVTMYP YSGAGIPPKF GDFEAQRHWM EITTNLPVID WYRNGTYNDL
101: TYWGLDYPPL TAYQSYIHGI FLRFFNPESV ALLSSRGHES YLGKLLMRWT VLSSDAFIFF PAALFFVLVY HRNRTRGGKS EVAWHIAMIL LNPCLILIDH
201: GHFQYNCISL GLTVGAIAAV LCESEVLTCV LFSLALSHKQ MSAYFAPAFF SHLLGKCLRR KSPILSVIKL GIAVIVTFVI FWWPYVHSLD DFLMVLSRLA
301: PFERGIYEDY VANFWCTTSI LIKWKNLFTT QSLKSISLAA TILASLPSMV QQILSPSNEG FLYGLLNSSM AFYLFSFQVH EKSILMPFLS ATLLALKLPD
401: HFSHLTYYAL FSMFPLLCRD KLLIPYLTLS FLFTVIYHSP GNHHAIQKTD VSFFSFKNFP GYVFLLRTHF FISVVLHVLY LTIKPPQKYP FLFEALIMIL
501: CFSYFIMFAF YTNYTQWTLS SHFGSSDKEK KQI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)