AT2G15240.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.499 golgi 0.496 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UNC-50 family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UNC-50 family protein; CONTAINS InterPro DOMAIN/s: UNC-50 (InterPro:IPR007881); Has 331 Blast hits to 331 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 93; Plants - 47; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:6615980..6618862 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 29428.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.54 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.41 | ||||||||||||||||||||||||||||
| Length | 252 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLPTTSRSRS SSSSSRANPM FLQYFRRIVK WQQMDVEYTF WQMLNLCTSP KVVYQHTKYH KQTKNQWARD DPAFIVICSL LLVVATVAYC VTYDHSSSHA 101: VVVVVSVLFT HFLITGAVIA TCCWFLTNSY LREETPNSHV VEQRVEWLYT FDVHCNSFFP MFVLLYVVHY FLSPLLIAHG FIPLLLSNLL FMVGASYYHY 201: LNFLGYDVLP FLERTTFFLY PIGVVIVLSP ILILSGFNPS RYFMNMYFSQ RL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)