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AT3G01380.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:21433285 (2011): plasma membrane
  • PMID:16618929 (2006): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : transferases;sulfuric ester hydrolases;catalytics;transferases
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
transferases;sulfuric ester hydrolases;catalytics;transferases; FUNCTIONS IN: sulfuric ester hydrolase activity, transferase activity, catalytic activity; INVOLVED IN: GPI anchor biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI ethanolamine phosphate transferase 1, C-terminal (InterPro:IPR017852), Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), GPI ethanolamine phosphate transferase 1 (InterPro:IPR007070), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Sulfatase (InterPro:IPR000917); Has 1139 Blast hits to 1068 proteins in 222 species: Archae - 0; Bacteria - 85; Metazoa - 475; Fungi - 399; Plants - 79; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1524eggNOG:KOG2124EMBL:CP002686EnsemblPlants:AT3G01380
EnsemblPlants:AT3G01380.1entrez:821231Gene3D:3.40.720.10GeneID:821231
GO:GO:0005783GO:GO:0005789GO:GO:0006506GO:GO:0008484
GO:GO:0016021GO:GO:0016740Gramene:AT3G01380.1hmmpanther:PTHR12250
InParanoid:F4JD48InterPro:IPR002591InterPro:IPR007070InterPro:IPR017849
InterPro:IPR017850InterPro:IPR017852KEGG:00231+2.-.-.-KEGG:ath:AT3G01380
KO:K05285ncoils:CoilOMA:GWISYASPANTHER:PTHR12250
PaxDb:F4JD48Pfam:PF00884Pfam:PF01663Pfam:PF04987
PRIDE:F4JD48ProteinModelPortal:F4JD48Proteomes:UP000006548Reactome:R-ATH-162710
RefSeq:NP_186787.4STRING:3702.AT3G01380.1SUPFAM:SSF53649TAIR:AT3G01380
TMHMM:TMhelixUniGene:At.41284unipathway:UPA00196UniProt:F4JD48
Coordinates (TAIR10) chr3:-:144288..149828
Molecular Weight (calculated) 112061.00 Da
IEP (calculated) 7.76
GRAVY (calculated) 0.25
Length 993 amino acids
Sequence (TAIR10)
(BLAST)
001: MFLVGELGRS MRSDGILGVG GSDQSRATAV VVASRRRWLK RRETWLVVLG VALHAVYMLS IFDIYFKTPI VHGMDPVPPR FSEPPAKRLV LLISDGLRAD
101: KFFEPDEEGK YRAPFLRNII KNQGRWGVSH ARPPTESRPG HVAIIAGFYE DPSAVTKGWK ANPVEFDSVF NQSRHTFAFG SPDIIPIFCS ALPHSTWNSY
201: PHEYEDFATD ASFLDEWSFD QFEGLLNRSH ADPKLKELLH QDKLVVFLHL LGCDSNGHAH RPYSSIYLNN VKVVDKIAER VYHLLEDYYR DNRTSYIFTA
301: DHGMSDKGSH GDGHPTNTDT PLVAWGAGIQ YPKPASGNSH SDSVTTFVDK HAHDMPTPYD WGLRRVERVD VNQADIAPLM STLLGLPCPV NSVGNLPLGY
401: MKLNEAEEVE AVVANTKQIL NQLLRKSYIK SSNSLFFKPF KPLVHHSFSL SQIDELISAK SYEAAMKLAV DLRNLSLEGL HYFQTYDWLM LMTVITLGYT
501: GWMIVLALHV LQCYSSLSGD LSKKEHLSVY ISGCLLMAIL SVLNLVEHSP PLYHAYIGMT VFLWTQIFSE YRLIRGLWKY LRERRADYFI KLLFAAAVAV
601: VIVELLVHSF TERKLYTWFF LIAGVVASIL LHFSIPWRSG IPVFVCISCW FLSVFTLMPA EIPDNNNLVV TSGAIIIVIS LAAKWLDTHA EGNKFWQSIT
701: FHESRTQMCS MLYCIQIFLV GVSSVMVFLS TKHRTQNQEL HSSHQFINWL VAGSSMVLPL FSANGILSRL SSIFLGFAPP FLLLSIGYEA VFYSALAVVL
801: MAWILFENAS HHSSKVKESS LSENNTEEHI TIGSDERYLQ LSDVRIPLVF MVLFNVAFFG TGNFASIASF EISSVYRFIT IFSPFLMAAL LIFKLFIPFM
901: LVICAFSAIT KLVRVPRLGC YFLVILFSDI MTIHFFFLVK NTGSWMEIGN SISHFGIVSA QVVFVLLLFA LTNLYTRSIR IKPLSTSPSL KTL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)