AT3G01380.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : transferases;sulfuric ester hydrolases;catalytics;transferases | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
transferases;sulfuric ester hydrolases;catalytics;transferases; FUNCTIONS IN: sulfuric ester hydrolase activity, transferase activity, catalytic activity; INVOLVED IN: GPI anchor biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI ethanolamine phosphate transferase 1, C-terminal (InterPro:IPR017852), Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), GPI ethanolamine phosphate transferase 1 (InterPro:IPR007070), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Sulfatase (InterPro:IPR000917); Has 1139 Blast hits to 1068 proteins in 222 species: Archae - 0; Bacteria - 85; Metazoa - 475; Fungi - 399; Plants - 79; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:144288..149828 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 112061.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.76 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.25 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 993 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFLVGELGRS MRSDGILGVG GSDQSRATAV VVASRRRWLK RRETWLVVLG VALHAVYMLS IFDIYFKTPI VHGMDPVPPR FSEPPAKRLV LLISDGLRAD 101: KFFEPDEEGK YRAPFLRNII KNQGRWGVSH ARPPTESRPG HVAIIAGFYE DPSAVTKGWK ANPVEFDSVF NQSRHTFAFG SPDIIPIFCS ALPHSTWNSY 201: PHEYEDFATD ASFLDEWSFD QFEGLLNRSH ADPKLKELLH QDKLVVFLHL LGCDSNGHAH RPYSSIYLNN VKVVDKIAER VYHLLEDYYR DNRTSYIFTA 301: DHGMSDKGSH GDGHPTNTDT PLVAWGAGIQ YPKPASGNSH SDSVTTFVDK HAHDMPTPYD WGLRRVERVD VNQADIAPLM STLLGLPCPV NSVGNLPLGY 401: MKLNEAEEVE AVVANTKQIL NQLLRKSYIK SSNSLFFKPF KPLVHHSFSL SQIDELISAK SYEAAMKLAV DLRNLSLEGL HYFQTYDWLM LMTVITLGYT 501: GWMIVLALHV LQCYSSLSGD LSKKEHLSVY ISGCLLMAIL SVLNLVEHSP PLYHAYIGMT VFLWTQIFSE YRLIRGLWKY LRERRADYFI KLLFAAAVAV 601: VIVELLVHSF TERKLYTWFF LIAGVVASIL LHFSIPWRSG IPVFVCISCW FLSVFTLMPA EIPDNNNLVV TSGAIIIVIS LAAKWLDTHA EGNKFWQSIT 701: FHESRTQMCS MLYCIQIFLV GVSSVMVFLS TKHRTQNQEL HSSHQFINWL VAGSSMVLPL FSANGILSRL SSIFLGFAPP FLLLSIGYEA VFYSALAVVL 801: MAWILFENAS HHSSKVKESS LSENNTEEHI TIGSDERYLQ LSDVRIPLVF MVLFNVAFFG TGNFASIASF EISSVYRFIT IFSPFLMAAL LIFKLFIPFM 901: LVICAFSAIT KLVRVPRLGC YFLVILFSDI MTIHFFFLVK NTGSWMEIGN SISHFGIVSA QVVFVLLLFA LTNLYTRSIR IKPLSTSPSL KTL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)