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AT4G17430.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : O-fucosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); Has 42 Blast hits to 40 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 37; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IESSeggNOG:ENOG4111F21EMBL:BT025328EMBL:CP002687
EnsemblPlants:AT4G17430EnsemblPlants:AT4G17430.1entrez:827454GeneID:827454
GO:GO:0005768GO:GO:0005794GO:GO:0005802GO:GO:0016021
GO:GO:0016757Gramene:AT4G17430.1hmmpanther:PTHR36050hmmpanther:PTHR36050:SF1
HOGENOM:HOG000084922InterPro:IPR019378KEGG:00514+2.4.1.221KEGG:ath:AT4G17430
OMA:ANTRKDCPfam:PF10250PhylomeDB:Q1JPM5Proteomes:UP000006548
RefSeq:NP_193473.1TAIR:AT4G17430TMHMM:TMhelixUniGene:At.50350
unipathway:UPA00378UniProt:Q1JPM5
Coordinates (TAIR10) chr4:-:9725201..9726801
Molecular Weight (calculated) 56838.30 Da
IEP (calculated) 8.35
GRAVY (calculated) -0.13
Length 507 amino acids
Sequence (TAIR10)
(BLAST)
001: MNNFFNPSRP SPRPWPNRKK QTDKSAIFLC SVSILVVFFI VVFFITYSEM PKSLFSISAF SGSVQFPQCR SEILTRTLLG QKFLWYAPHS GFSNQLSEFK
101: NALLMAGILN RTLIIPPILD HHAVALGSCP KFRVLSPSEI RISVWNHSIE LLKTDRYVSM ADIVDISSLV SSSAVRVIDF RYFASLQCGV DLETLCTDDL
201: AEQSQAYESL KQCGYLLSGV RGNVDKCLYA VDEDCRTTVW TYKNGEADGR LDSFQPDEKL KKKKKLSNVR RRRDVYKTLG HGTEAESAAI LAFGSLFTAP
301: YKGSELYIDI HKSPKIKSLV EKVDFLPFVR EIMIAGKKFA SETIKAPFLC AQLRLLDGQF KNHRESTFTG LYQKLEALSV KNPGLINVFV MTDLPEFNWT
401: GTYLGDLSKN STNFKLHFIG EQDEFLARTE HELDSASHGQ KFGSIPMSLD SIKKMQTHCY PHGGSNVQLY IEEAVCSCAS LGFVGTPGST IADSVEMMRK
501: YNACSSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)