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AT5G40830.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.915
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)		 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G27230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJ6GeggNOG:ENOG4111F5TEMBL:AB011477EMBL:BT002476
EMBL:BT008498EMBL:CP002688EnsemblPlants:AT5G40830EnsemblPlants:AT5G40830.1
EnsemblPlants:AT5G40830.2entrez:834083Gene3D:3.40.50.150GeneID:834083
GO:GO:0008168GO:GO:0016021Gramene:AT5G40830.1Gramene:AT5G40830.2
hmmpanther:PTHR10108hmmpanther:PTHR10108:SF837HOGENOM:HOG000240829InterPro:IPR004159
InterPro:IPR029063KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-
KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-KEGG:00380+2.1.1.-
KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-
KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-KEGG:00981+2.1.1.-KEGG:ath:AT5G40830
OMA:NFYCGNDPfam:PF03141PhylomeDB:Q9FKS3Proteomes:UP000006548
RefSeq:NP_001031989.1RefSeq:NP_198899.1STRING:3702.AT5G40830.1SUPFAM:SSF53335
TAIR:AT5G40830TMHMM:TMhelixUniGene:At.30267UniProt:Q9FKS3
Coordinates (TAIR10) chr5:-:16354611..16355855
Molecular Weight (calculated) 46524.30 Da
IEP (calculated) 8.33
GRAVY (calculated) -0.10
Length 414 amino acids
Sequence (TAIR10)
(BLAST) 		001: MGSVSLKIGD GTARFKRSTL FSSAINLLML FSIVTTNLFA LYAFSSRSQS HTPHPLHSNN VSLVSQHLSL ILREIDSSHH TLTQMEKQII GYESLDLSQQ
101: EVPQELKLFL QQHQLPLGKD SRTGITQMVA SVGHSCEMSL DLLSQYMSYN VFEKCPDDWS LAQKLILRAC EPLPRRRCLA KTVHKPGLAL FPDSLWRPVG
201: NSSVNWSGLG CKSFECLKGK KLSRDCVGCF DLATSHEKDR FVKVNGKTDF LIDDVLDLGD GKIRIGFDIS SGSGTFAARM AEKNVNIISN TLNIDAPFSE
301: FIAARGIFPL FMSLDQRLPF YDNVFDLIHA SNGLDLAVSN KPEKLEFLMF DLDRILKPGG LFWLDNFYCG NDEKKRVLTR LIERFGYKKL KWVVGEKTDA
401: EVFLSAVLQK PARI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)