AT1G64650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Major facilitator superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Major facilitator superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G27720.1); Has 889 Blast hits to 882 proteins in 311 species: Archae - 19; Bacteria - 505; Metazoa - 88; Fungi - 69; Plants - 135; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:24023805..24026336 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50660.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.66 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.48 | ||||||||||||||||||||||||||||||||
| Length | 462 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEIFYFVVFG GLAAIVAGLE LSKSNKDRIN TSSAFNSFKN NYLLVYSLMM AGDWLQGPYV YYLYSTYGFG KGEIGQLFIA GFGSSMLFGT IVGSLADKQG 101: RKRASITYCI TYILSCITKH SPQYKVLMVG RVLGGIATSL LFSAFESWLV AEHNKRGFEQ QWLSVTFSKA IFLGNGLVAI IAGLFGNYLV DSLSLGPVAP 201: FDAAACFLAI GMAVIISSWS ENYGDPSENK DLLTQFKNAA SAIASDEKIA LLGAIQSLFE GSMYTFVFLW TPALSPNEED IPHGFIFATF MLASMLGSSI 301: ASRLLAHSSP KVESYMQIVF VISSAALMLP VVTSFLVAPS GVKGGSISFS GCIQLMGFCT FEACVGIFWP SIMKMRSQYI PEEARSTIMN FFRIPLNIFV 401: CLVLYNVDAF PMTVMFGMCS VFLFVASILQ RRLMNVAEIH KSRSQEWSAE KEMTSEADPL NP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)