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AT1G24400.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.875
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : lysine histidine transporter 2
Curator
Summary (TAIR10)
High-affinity transporter for neutral and acidic amino acids, expressed in tapetum tissue of anthers
Computational
Description (TAIR10)
lysine histidine transporter 2 (LHT2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G67640.1); Has 4292 Blast hits to 4283 proteins in 340 species: Archae - 11; Bacteria - 170; Metazoa - 1210; Fungi - 747; Plants - 1636; Viruses - 0; Other Eukaryotes - 518 (source: NCBI BLink).
Protein Annotations
BioGrid:24295eggNOG:COG0814eggNOG:KOG1303EMBL:AB046210
EMBL:AC000103EMBL:CP002684EnsemblPlants:AT1G24400EnsemblPlants:AT1G24400.1
entrez:839057GeneID:839057Genevisible:Q9LRB5GO:GO:0005886
GO:GO:0006865GO:GO:0015293GO:GO:0016021Gramene:AT1G24400.1
hmmpanther:PTHR22950hmmpanther:PTHR22950:SF235HOGENOM:HOG000241295InParanoid:Q9LRB5
InterPro:IPR013057KEGG:ath:AT1G24400OMA:RTTFWIMPaxDb:Q9LRB5
Pfam:PF01490Pfam:Q9LRB5PhylomeDB:Q9LRB5PIR:C86378
PRIDE:Q9LRB5PRO:PR:Q9LRB5ProteinModelPortal:Q9LRB5Proteomes:UP000006548
RefSeq:NP_564217.1STRING:3702.AT1G24400.1TAIR:AT1G24400tair10-symbols:AATL2
tair10-symbols:ATLHT2tair10-symbols:LHT2TCDB:2.A.18.2.9TMHMM:TMhelix
UniGene:At.1555UniProt:Q9LRB5
Coordinates (TAIR10) chr1:-:8651563..8653561
Molecular Weight (calculated) 49155.00 Da
IEP (calculated) 8.87
GRAVY (calculated) 0.62
Length 441 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNSEMSASE VAAAKQKNVD DWLPITSSRN AKWWYSAFHN VTAMVGAGVL SLPYAMSNLG WGPGVTIMVM SWIITLYTLW QMVEMHEIVP GKRLDRYHEL
101: GQHAFGEKLG LWIVVPQQLI VEVGVDIVYM VTGGASLKKV HQLVCPDCKE IRTTFWIMIF ASVHFVISHL PNFNSISIIS LAAAVMSLTY STIAWAASVH
201: KGVHPDVDYS PRASTDVGKV FNFLNALGDV AFAYAGHNVV LEIQATIPST PEMPSKVPMW RGVIVAYIVV AICYFPVAFL GYYIFGNSVD DNILITLEKP
301: IWLIAMANMF VVIHVIGSYQ IFAMPVFDML ETVLVKKMNF NPSFKLRFIT RSLYVAFTMI VAICVPFFGG LLGFFGGFAF APTTYYLPCI MWLVLKKPKR
401: FGLSWTANWF CIIVGVLLTI LAPIGGLRTI IINAKTYKFF S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)