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AT1G66280.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.992
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27122571 (2016): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24012629 (2013): nucleus
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:21531424 (2011): plastid
  • PMID:19334764 (2009): plasma membrane
  • PMID:16356755 (2006): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Glycosyl hydrolase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
BGLU22; FUNCTIONS IN: beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to salt stress, cellular response to cold, cellular response to salt stress; LOCATED IN: membrane; EXPRESSED IN: root, callus, pollen tube, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G66270.1); Has 11192 Blast hits to 10883 proteins in 1464 species: Archae - 140; Bacteria - 7710; Metazoa - 697; Fungi - 202; Plants - 1444; Viruses - 0; Other Eukaryotes - 999 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G66280-MONOMERBioGrid:28166BRENDA:3.2.1.21CAZy:GH1EC:3.2.1.21eggNOG:COG2723eggNOG:KOG0626
EMBL:AC020665EMBL:AK318849EMBL:AY074378EMBL:CP002684EnsemblPlants:AT1G66280EnsemblPlants:AT1G66280.1entrez:842945
Gene3D:3.20.20.80GeneID:842945Genevisible:Q9C8Y9GO:GO:0005783GO:GO:0005788GO:GO:0005975GO:GO:0008422
GO:GO:0009506GO:GO:0009651GO:GO:0016020GO:GO:0070417GO:GO:0071472hmmpanther:PTHR10353hmmpanther:PTHR10353:SF37
HOGENOM:HOG000088630InParanoid:Q9C8Y9IntAct:Q9C8Y9InterPro:IPR001360InterPro:IPR013781InterPro:IPR017853InterPro:IPR033132
iPTMnet:Q9C8Y9KEGG:ath:AT1G66280KO:K01188OMA:SARIYSEPANTHER:PTHR10353PaxDb:Q9C8Y9Pfam:PF00232
Pfam:Q9C8Y9PhylomeDB:Q9C8Y9PIR:H96687PRIDE:Q9C8Y9PRINTS:PR00131PRO:PR:Q9C8Y9PROSITE:PS00014
PROSITE:PS00653ProteinModelPortal:Q9C8Y9Proteomes:UP000006548RefSeq:NP_176802.1scanprosite:PS00653SMR:Q9C8Y9STRING:3702.AT1G66280.1
SUPFAM:SSF51445TAIR:AT1G66280tair10-symbols:BGLU22UniGene:At.47576UniGene:At.75574UniProt:Q9C8Y9
Coordinates (TAIR10) chr1:-:24706759..24709737
Molecular Weight (calculated) 59783.80 Da
IEP (calculated) 7.22
GRAVY (calculated) -0.43
Length 524 amino acids
Sequence (TAIR10)
(BLAST)
001: MALQKFPLLG LLFLITIVVS STIAVDDPVC PTTSKLSRAS FPNGFVFGTA TAAFQVEGAI NETCRGPALW DIFCKRNPER CSGHNADVAV DFFHRYKEDI
101: QLMKNLNTDA FRLSIAWSRI FPHGRKEKGV SQAGVKFYHD LIDELLKNGI IPFVTVFHWD TPQDLEDEYG GFLSENIVKD FREYADYVFT EYGGKVKNWI
201: TFNEPWVFAH AGYDVGKKAP GRCSRYLKGC EDRDGRSGYE AYLVSHNLLN AHAEAVEVFR QKVKGGKIGI AHSPAWFEPH DLKDSNDVPT VSRVLDFMLG
301: WHLDPTTFGD YPQIMKDLLG HRLPKFTSSQ KAKLKDSTDF VGLNYYTSTF SNHNEKPDPS TPSWKQDSLV AWEPKNVDHS AIGSQPLTAA LPVYAKGFRS
401: LLKYIKDKYA NPEIMIMENG YGDKLKDKDS VEVGTADYNR KYYLQRHLLA MNEAICIDKV RVTGYFVWSL LDNFEWQDGY NNRFGLYYVD FKNNLTRYEK
501: ESAKYYKDFL GQGVRPSALK KDEL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)