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AT5G02620.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 1.000
ASURE: endoplasmic reticulum
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ankyrin-like1
Curator
Summary (TAIR10)
Encodes a member of the ankyrin repeat protein. Localized in the endoplasmic reticulum.
Computational
Description (TAIR10)
ankyrin-like1 (ANK1); LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G07710.1); Has 75028 Blast hits to 30555 proteins in 1218 species: Archae - 81; Bacteria - 7319; Metazoa - 34469; Fungi - 7763; Plants - 5551; Viruses - 723; Other Eukaryotes - 19122 (source: NCBI BLink).
Protein Annotations
BioGrid:17131eggNOG:COG0666eggNOG:KOG0504EMBL:AK226242EMBL:AL162971EMBL:BT015133EMBL:BT020220
EMBL:CP002688EnsemblPlants:AT5G02620EnsemblPlants:AT5G02620.1entrez:831855Gene3D:1.25.40.20GeneID:831855Genevisible:Q6AWW5
GO:GO:0005783GO:GO:0005886GO:GO:0016021Gramene:AT5G02620.1hmmpanther:PTHR24186hmmpanther:PTHR24186:SF4HOGENOM:HOG000234376
InParanoid:Q6AWW5InterPro:IPR002110InterPro:IPR020683InterPro:IPR026961iPTMnet:Q6AWW5KEGG:ath:AT5G02620OMA:MACIMIS
PaxDb:Q6AWW5Pfam:PF00023Pfam:PF12796Pfam:PF13962Pfam:Q6AWW5Pfscan:PS50088Pfscan:PS50297
PhylomeDB:Q6AWW5PIR:T48283PRIDE:Q6AWW5PRO:PR:Q6AWW5PROSITE:PS50088PROSITE:PS50297ProteinModelPortal:Q6AWW5
Proteomes:UP000006548RefSeq:NP_195882.2SMART:SM00248SMR:Q6AWW5STRING:3702.AT5G02620.1SUPFAM:SSF48403TAIR:AT5G02620
tair10-symbols:ANK1tair10-symbols:ATANK1TMHMM:TMhelixUniGene:At.33394UniProt:Q6AWW5
Coordinates (TAIR10) chr5:+:589666..591536
Molecular Weight (calculated) 56926.40 Da
IEP (calculated) 9.19
GRAVY (calculated) -0.02
Length 524 amino acids
Sequence (TAIR10)
(BLAST)
001: MKEIKKTMTK QMTARRDDTP LHTAVREGKT DLLLEMIGEH DGVELKELLA EQNQSGETAL YVAAEYGYTD MVKILMKHSD SVLAGTKAKN GFDAFHIAAK
101: NGNLQVLDVL IEANPELSFT FDSSKTTALH TAASQGHGEI VCFLLDKGVD LAAIARSNGK TALHSAARNG HTVIVKKLIE KKAGMVTRVD KKGQTALHMA
201: VKGQNTEIVD VLMEADGSLI NSADNKGNTP LHIAVRKNRA EIVQTVLKYC EVSRVAVNKS GETALDIAEK TGLHEIVPLL QKIGMQNARS IKPAEKVEPS
301: GSSRKLKETV SEIGHEVHTQ LEQTGRTRRE IQGIAKRVNK MHTEGLNNAI NSTTLVAILI ATVAFAAIFN VPGQYTDDPK DVPPGYSLGE ARAAPRPEFL
401: IFVVFDSFAL FISLAVVVVQ TSVVVIERRA KKQMMAIINK LMWMACIMIS VAFVSLSFVV VGEKEKPLAV GVTAIGALIM VSTLGTMCYW VIANRIEGSK
501: SSPASMMSDP ELADSKHNRK LYAV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)