AT3G42725.1::SUBA5

AT3G42725.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
extracellular 0.868
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
		PMID:24833385 (2014): AT4G30850.1:None: PMID:24833385 (2014): AT1G16170.1:None: PMID:24833385 (2014): AT1G07860.1:None: PMID:24833385 (2014): AT1G47640.1:None: PMID:24833385 (2014): AT3G13175.1:None: PMID:24833385 (2014): AT5G52420.1:None: PMID:24833385 (2014): AT5G06320.1:None: PMID:24833385 (2014): AT4G37370.1:None: PMID:24833385 (2014): AT3G57220.1:None: PMID:24833385 (2014): AT2G41490.1:None: PMID:24833385 (2014): AT4G37680.1:None: PMID:24833385 (2014): AT3G17000.1:None: PMID:24833385 (2014): AT1G17280.1:None: PMID:24833385 (2014): AT5G20270.1:None: PMID:24833385 (2014): AT2G41705.1:None: PMID:24833385 (2014): AT1G11940.1:None: PMID:24833385 (2014): AT3G12180.1:None: PMID:24833385 (2014): AT5G47180.1:None: PMID:24833385 (2014): AT1G03950.1:None: PMID:24833385 (2014): AT3G10640.1:None: PMID:24833385 (2014): AT2G26180.1:None: PMID:24833385 (2014): AT3G48890.1:None: PMID:24833385 (2014): AT1G65690.1:None: PMID:24833385 (2014): AT5G11890.1:None: PMID:24833385 (2014): AT3G26370.1:None: PMID:24833385 (2014): AT1G34640.1:None: PMID:24833385 (2014): AT3G66654.1:None: PMID:24833385 (2014): AT2G22425.1:None: PMID:24833385 (2014): AT4G30500.1:None: PMID:24833385 (2014): AT5G49540.1:None: PMID:24833385 (2014): AT2G37050.1:None: PMID:24833385 (2014): AT4G14455.1:None: PMID:21798944 (2011): AT5G24290.1:Y2H: PMID:21798944 (2011): AT4G19030.1:None: PMID:21798944 (2011): AT1G27300.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

no coexpression data

AT3G17000.1 endoplasmic reticulum
AT5G52420.1 endoplasmic reticulum
AT5G47180.1 endoplasmic reticulum
AT4G37370.1 endoplasmic reticulum
AT3G57220.1 endoplasmic reticulum
AT3G48890.1 endoplasmic reticulum
AT3G13175.1 endoplasmic reticulum
AT3G12180.1 endoplasmic reticulum
AT2G41490.1 endoplasmic reticulum
AT1G07860.1 endoplasmic reticulum
AT2G22425.1 endoplasmic reticulum
AT1G47640.1 endoplasmic reticulum
AT1G34640.1 extracellular
AT4G14455.1 golgi
AT1G11940.1 golgi
AT4G37680.1 golgi
AT4G30850.1 golgi
AT3G66654.1 golgi
AT1G17280.1 golgi
AT1G27300.1 golgi
AT3G26370.1 golgi
AT4G30500.1 endoplasmic reticulum, golgi
AT1G03950.1 nucleus
AT3G10640.1 nucleus
AT2G26180.1 nucleus
AT4G19030.1 plasma membrane
AT2G41705.1 plasma membrane
AT1G16170.1 plasma membrane
AT1G65690.1 plasma membrane
AT5G06320.1 plasma membrane
AT5G11890.1 plasma membrane
AT5G20270.1 plasma membrane
AT2G37050.1 plasma membrane
AT5G24290.1 vacuole
AT5G49540.1 vacuole

Description (TAIR10)

protein_coding : Putative membrane lipoprotein

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 18 Blast hits to 18 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410IX5I	eggNOG:ENOG410Y7F3	EMBL:AY050920	EMBL:AY113968
EMBL:CP002686	EnsemblPlants:AT3G42725	EnsemblPlants:AT3G42725.1	entrez:823305
GeneID:823305	GO:GO:0016021	Gramene:AT3G42725.1	hmmpanther:PTHR39113
hmmpanther:PTHR39113:SF1	HOGENOM:HOG000151169	IntAct:Q949S3	KEGG:ath:AT3G42725
OMA:SCLNFTL	Pfscan:PS51257	PhylomeDB:Q949S3	Proteomes:UP000006548
RefSeq:NP_566864.1	STRING:3702.AT3G42725.1	TAIR:AT3G42725	TMHMM:TMhelix
UniGene:At.26545	UniProt:Q949S3

Coordinates (TAIR10)

chr3:-:14843082..14843690

Molecular Weight (calculated)

22705.10 Da

IEP (calculated)

8.41

GRAVY (calculated)

0.39

Length

202 amino acids

Sequence (TAIR10)
(BLAST)

001: MASFHRKLCL FQNILVSCLN FTLLLLSLCS FVPIILLRNP PTSLGLAFLA VSLVSLISSF GSASSHQSRS CFIARITLHV SSLTGQFIAV LMLFSREKQS
101: LSLLISTRDP REAKALVRVE CGVFVAMIPL QIMVLVLACL LHCYWVREFE GLDVESEDSF RRKCNRRVST AEDGTSSDLK KMELDEKMNV KHVQWVKTDF
201: EG