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AT3G03450.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : RGA-like 2
Curator
Summary (TAIR10)
Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.
Computational
Description (TAIR10)
RGA-like 2 (RGL2); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like protein 3 (TAIR:AT5G17490.1); Has 2697 Blast hits to 2637 proteins in 314 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2690; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Protein Annotations
BioGrid:6584DIP:DIP-37661NeggNOG:ENOG410IQYHeggNOG:ENOG410YBFY
EMBL:AC009895EMBL:AK118009EMBL:CP002686EnsemblPlants:AT3G03450
EnsemblPlants:AT3G03450.1entrez:821251GeneID:821251Genevisible:Q8GXW1
GO:GO:0000989GO:GO:0003700GO:GO:0005634GO:GO:0006351
GO:GO:0006952GO:GO:0009737GO:GO:0009739GO:GO:0009740
GO:GO:0009908GO:GO:0009938GO:GO:0010187GO:GO:0030154
Gramene:AT3G03450.1hmmpanther:PTHR31636hmmpanther:PTHR31636:SF47HOGENOM:HOG000238577
InParanoid:Q8GXW1IntAct:Q8GXW1InterPro:IPR005202InterPro:IPR021914
InterPro:IPR030006KEGG:ath:AT3G03450KO:K14494MINT:MINT-8069272
OMA:WRIRMKSPANTHER:PTHR31636:SF47PaxDb:Q8GXW1Pfam:PF03514
Pfam:PF12041Pfam:Q8GXW1Pfscan:PS50985PhylomeDB:Q8GXW1
PRIDE:Q8GXW1PRO:PR:Q8GXW1PROSITE:PS50985ProteinModelPortal:Q8GXW1
Proteomes:UP000006548RefSeq:NP_186995.1SMR:Q8GXW1STRING:3702.AT3G03450.1
TAIR:AT3G03450tair10-symbols:RGL2UniGene:At.18489UniGene:At.67027
UniProt:Q8GXW1
Coordinates (TAIR10) chr3:-:819636..821279
Molecular Weight (calculated) 60497.20 Da
IEP (calculated) 4.55
GRAVY (calculated) -0.31
Length 547 amino acids
Sequence (TAIR10)
(BLAST)
001: MKRGYGETWD PPPKPLPASR SGEGPSMADK KKADDDNNNS NMDDELLAVL GYKVRSSEMA EVAQKLEQLE MVLSNDDVGS TVLNDSVHYN PSDLSNWVES
101: MLSELNNPAS SDLDTTRSCV DRSEYDLRAI PGLSAFPKEE EVFDEEASSK RIRLGSWCES SDESTRSVVL VDSQETGVRL VHALVACAEA IHQENLNLAD
201: ALVKRVGTLA GSQAGAMGKV ATYFAQALAR RIYRDYTAET DVCAAVNPSF EEVLEMHFYE SCPYLKFAHF TANQAILEAV TTARRVHVID LGLNQGMQWP
301: ALMQALALRP GGPPSFRLTG IGPPQTENSD SLQQLGWKLA QFAQNMGVEF EFKGLAAESL SDLEPEMFET RPESETLVVN SVFELHRLLA RSGSIEKLLN
401: TVKAIKPSIV TVVEQEANHN GIVFLDRFNE ALHYYSSLFD SLEDSYSLPS QDRVMSEVYL GRQILNVVAA EGSDRVERHE TAAQWRIRMK SAGFDPIHLG
501: SSAFKQASML LSLYATGDGY RVEENDGCLM IGWQTRPLIT TSAWKLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)