AT2G23760.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : BEL1-like homeodomain 4 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw2 and saw1 may act redundantly to repress BP in leaves. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
BEL1-like homeodomain 4 (BLH4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: N-terminal protein myristoylation, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeobox KN domain (InterPro:IPR008422), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 2 (TAIR:AT4G36870.2); Has 5634 Blast hits to 5559 proteins in 359 species: Archae - 0; Bacteria - 6; Metazoa - 2382; Fungi - 373; Plants - 2492; Viruses - 0; Other Eukaryotes - 381 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:10107951..10112736 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 69275.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.88 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.76 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 627 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGLATTTSSM SQDYHHHQGI FSFSNGFHRS SSTTHQEEVD ESAVVSGAQI PVYETAGMLS EMFAYPGGGG GGSGGEILDQ STKQLLEQQN RHNNNNNSTL 101: HMLLPNHHQG FAFTDENTMQ PQQQQHFTWP SSSSDHHQNR DMIGTVHVEG GKGLSLSLSS SLAAAKAEEY RSIYCAAVDG TSSSSNASAH HHQFNQFKNL 201: LLENSSSQHH HHQVVGHFGS SSSSPMAASS SIGGIYTLRN SKYTKPAQEL LEEFCSVGRG HFKKNKLSRN NSNPNTTGGG GGGGSSSSAG TANDSPPLSP 301: ADRIEHQRRK VKLLSMLEEV DRRYNHYCEQ MQMVVNSFDQ VMGYGAAVPY TTLAQKAMSR HFRCLKDAVA VQLKRSCELL GDKEAAGAAS SGLTKGETPR 401: LRLLEQSLRQ QRAFHHMGMM EQEAWRPQRG LPERSVNILR AWLFEHFLNP YPSDADKHLL ARQTGLSRNQ VSNWFINARV RLWKPMVEEM YQQEAKEREE 501: AEEENENQQQ QRRQQQTNNN DTKPNNNENN FTVITAQTPT TMTSTHHEND SSFLSSVAAA SHGGSDAFTV ATCQQDVSDF HVDGDGVNVI RFGTKQTGDV 601: SLTLGLRHSG NIPDKNTSFS VRDFGDF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)