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AT5G01840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ovate family protein 1
Curator
Summary (TAIR10)
Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.
Computational
Description (TAIR10)
ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:17089eggNOG:ENOG410IY1KeggNOG:ENOG410YV5MEMBL:AL162351
EMBL:CP002688EnsemblPlants:AT5G01840EnsemblPlants:AT5G01840.1entrez:831813
GeneID:831813Genevisible:Q9LZW2GO:GO:0003677GO:GO:0005730
GO:GO:0005856GO:GO:0006281GO:GO:0006351GO:GO:0045892
GO:GO:0051510Gramene:AT5G01840.1hmmpanther:PTHR33057hmmpanther:PTHR33057:SF22
HOGENOM:HOG000238410InParanoid:Q9LZW2IntAct:Q9LZW2InterPro:IPR006458
InterPro:IPR025830KEGG:ath:AT5G01840OMA:DEYHAIIPaxDb:Q9LZW2
Pfam:PF04844Pfam:PF13724Pfam:Q9LZW2Pfscan:PS51754
PhylomeDB:Q9LZW2PIR:T48205PRIDE:Q9LZW2PRO:PR:Q9LZW2
PROSITE:PS51754ProteinModelPortal:Q9LZW2Proteomes:UP000006548RefSeq:NP_195804.1
STRING:3702.AT5G01840.1TAIR:AT5G01840tair10-symbols:ATOFP1tair10-symbols:OFP1
TIGRfam:TIGR01568TIGRFAMs:TIGR01568UniGene:At.33494UniProt:Q9LZW2
Coordinates (TAIR10) chr5:+:324552..325364
Molecular Weight (calculated) 30031.70 Da
IEP (calculated) 11.04
GRAVY (calculated) -0.80
Length 270 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNNYRFKLS ELIPNAWFYK LRDMSKSKKK NLQSQPNSTT SKKKHHAVPT PTSTTPLSPR PPRRPSHSSK APPSHPPRKS SGNRLRHRAT VDSKSSTTSG
101: DSTTTETGSF SPDFRSDQVL LPDESLTGSW HSPCSSKLSK TATFTPPPEL ELRPIITKTA ATARKTAVNS PAGVRLRMRS PRISVSSSAR RSGSSARRSR
201: AVVKASVDPK RDFKESMEEM IAENKIRATK DLEELLACYL CLNSDEYHAI IINVFKQIWL DLNLPPPHSK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)