AT5G01850.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.642 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G27560.1); Has 131148 Blast hits to 129643 proteins in 5072 species: Archae - 162; Bacteria - 15033; Metazoa - 49603; Fungi - 12189; Plants - 33321; Viruses - 522; Other Eukaryotes - 20318 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:332829..334180 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37590.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.78 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 333 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSDDTIEES LLVDPKLLFI GSKIGEGAHG KVYQGRYGRQ IVAIKVVNRG SKPDQQSSLE SRFVREVNMM SRVQHHNLVK FIGACKDPLM VIVTELLPGM 101: SLRKYLTSIR PQLLHLPLAL SFALDIARAL HCLHANGIIH RDLKPDNLLL TENHKSVKLA DFGLAREESV TEMMTAETGT YRWMAPELYS TVTLRQGEKK 201: HYNNKVDVYS FGIVLWELLT NRMPFEGMSN LQAAYAAAFK QERPVMPEGI SPSLAFIVQS CWVEDPNMRP SFSQIIRLLN EFLLTLTPPP PQPLPETATN 301: RTNGRAITEF SIRPKGKFAF IRQLFAAKRN INS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)