AT1G48210.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17410.1); Has 107658 Blast hits to 106510 proteins in 4484 species: Archae - 105; Bacteria - 12834; Metazoa - 39234; Fungi - 8236; Plants - 31887; Viruses - 332; Other Eukaryotes - 15030 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:17799551..17801798 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39591.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.03 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 363 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSCFGWCGSE DFRNATDTGP RPAHNPAGYN GGHYQRADPP MNQPVIPMQP ISVPAIPVDE LRDITDNYGS KTLIGEGSYG RVFYGVLKSG GAAAIKKLDS 101: SKQPDQEFLS QISMVSRLRH DNVTALMGYC VDGPLRVLAY EFAPKGSLHD TLHGKKGAKG ALRGPVMTWQ QRVKIAVGAA RGLEYLHEKV SPQVIHRDIK 201: SSNVLLFDDD VAKIGDFDLS DQAPDMAARL HSTRVLGTFG YHAPEYAMTG TLSSKSDVYS FGVVLLELLT GRKPVDHTLP RGQQSLVTWA TPKLSEDKVK 301: QCVDARLLGE YPPKAVGKLA AVAALCVQYE ANFRPNMSIV VKALQPLLNP PRSAPQTPHR NPY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)