AT3G55450.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.925 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : PBS1-like 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
PBS1-like 1 (PBL1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: botrytis-induced kinase1 (TAIR:AT2G39660.1); Has 117813 Blast hits to 116491 proteins in 4459 species: Archae - 97; Bacteria - 13696; Metazoa - 43658; Fungi - 9742; Plants - 33316; Viruses - 361; Other Eukaryotes - 16943 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:+:20558129..20559963 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 43089.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.51 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 389 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MGSCLSSRVL NKSSSGLDDL HLSSCKSSSS ATAHKTEGEI LSSTTVKSFS FNELKLATRN FRSDSVVGEG GFGCVFRGWL DETTLTPTKS SSGLVIAVKR 101: LNPDGFQGHR EWLTEINYLG QLSHPNLVKL IGYCLEDEQR LLVYEFMHKG SLENHLFANG NKDFKPLSWI LRIKVALDAA KGLAFLHSDP VKVIYRDIKA 201: SNILLDSDFN AKLSDFGLAR DGPMGEQSYV STRVMGTFGY AAPEYVSTGH LNARSDVYSF GVVLLELLCG RQALDHNRPA KEQNLVDWAR PYLTSRRKVL 301: LIVDTRLNSQ YKPEGAVRLA SIAVQCLSFE PKSRPTMDQV VRALVQLQDS VVKPANVDPL KVKDTKKLVG LKTEDKYQRN GLNKKTVGL |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)