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AT1G19700.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : BEL1-like homeodomain 10
Curator
Summary (TAIR10)
Encodes a member of the BEL family of homeodomain proteins. Its interaction with PLP (PAS/LOV PROTEIN) is diminished by blue light.
Computational
Description (TAIR10)
BEL1-like homeodomain 10 (BEL10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 3 (TAIR:AT1G75410.2); Has 5190 Blast hits to 5190 proteins in 343 species: Archae - 0; Bacteria - 4; Metazoa - 2115; Fungi - 347; Plants - 2475; Viruses - 0; Other Eukaryotes - 249 (source: NCBI BLink).
Protein Annotations
BioGrid:23797eggNOG:ENOG410XPMQeggNOG:KOG0773EMBL:AC007797
EMBL:AC024609EMBL:AY052366EMBL:AY059666EMBL:AY570508
EMBL:CP002684EMBL:DQ132268EMBL:DQ132269EMBL:DQ132270
EMBL:DQ132271EMBL:DQ132272EMBL:DQ132273EMBL:DQ132274
EMBL:DQ132275EMBL:DQ132276EMBL:DQ132277EMBL:DQ132278
EMBL:DQ132279EMBL:DQ132280EMBL:DQ132281EMBL:DQ132282
EMBL:DQ132283EMBL:DQ132284EMBL:DQ132285EMBL:DQ132286
EnsemblPlants:AT1G19700EnsemblPlants:AT1G19700.1EnsemblPlants:AT1G19700.2EnsemblPlants:AT1G19700.3
entrez:838558Gene3D:1.10.10.60GeneID:838558Genevisible:Q9FXG8
GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351
hmmpanther:PTHR11850hmmpanther:PTHR11850:SF111InParanoid:Q9FXG8IntAct:Q9FXG8
InterPro:IPR001356InterPro:IPR006563InterPro:IPR008422InterPro:IPR009057
iPTMnet:Q9FXG8KEGG:ath:AT1G19700ncoils:CoilOMA:EPNSTNQ
PaxDb:Q9FXG8Pfam:PF05920Pfam:PF07526Pfam:Q9FXG8
Pfscan:PS50071PhylomeDB:Q9FXG8PIR:H86329PRIDE:Q9FXG8
PRO:PR:Q9FXG8PROSITE:PS00027PROSITE:PS50071ProteinModelPortal:Q9FXG8
Proteomes:UP000006548RefSeq:NP_001154352.1RefSeq:NP_001185040.1RefSeq:NP_173400.1
SMART:SM00389SMART:SM00574SMR:Q9FXG8STRING:3702.AT1G19700.1
SUPFAM:SSF46689TAIR:AT1G19700tair10-symbols:BEL10tair10-symbols:BLH10
UniGene:At.26495UniProt:Q9FXG8
Coordinates (TAIR10) chr1:-:6809958..6811854
Molecular Weight (calculated) 60639.50 Da
IEP (calculated) 6.29
GRAVY (calculated) -0.77
Length 538 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVYYTSNVG CYQQEPIFLN HQQQNQQASS SSAAASFTVT GGDTVRNEMV FIPPTTTGDV VTGNGTVSSS DLSFHDGQGL SLSLGTQISV APFHFHQYQL
101: GFTSQNPSIS VKETSPFHVD EMSVKSKEMI LLGQSDPSSG YAGNGGNGFY NNYRYNETSG GFMSSVLRSR YLKPAQNLLD EVVSVKKELN QMGKKKMKVN
201: DFNSGSKEIE GGGGELSSDS NGKSIELSTI EREELQNKKN KLLTMVDEVD KRYNQYYHQM EALASSFEIV AGLGSAKPYT SVALNRISRH FRALRDAIKE
301: QIQIVREKLG EKGGESLDEQ QGERIPRLRY LDQRLRQQRA LHQQLGMVRP AWRPQRGLPE NSVSVLRAWL FEHFLHPYPK ESEKIMLAKQ TGLSKNQVAN
401: WFINARVRLW KPMIEEMYKE EFGDESELLI SKSSQEPNST NQEDSSSQQQ QQQENNNNSN LAYSSADTTN IVFSSETKPD RVLGNDNDPQ QQQINRSSDY
501: DTLMNYHGFG VDDYRYISGS NQQESRFSNS HHLHDFVV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)