AT2G32295.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.981 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : EXS (ERD1/XPR1/SYG1) family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
EXS (ERD1/XPR1/SYG1) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT5G35730.1); Has 838 Blast hits to 834 proteins in 189 species: Archae - 2; Bacteria - 0; Metazoa - 243; Fungi - 250; Plants - 230; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:13719527..13721959 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54056.10 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.58 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.30 | ||||||||||||||||||||||||||||
| Length | 463 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFGGVLSMPV NNPHLRKSGS RHIVTNLGDN DLKTASMLLS TYAKLQTPIF LRSLKVALYI GGLYVCGKVG LESVMKMGVE TRELFFYETF LYYNPLLLIT 101: LMVWLWGVNL WVFSRSGVDY AAIFYLGSDH LSHREIWKCA RWMTIIILTS MTAYLYLYSH GDVKLAASQP VVLYFSAVII LIIPFNIFYM SSRYYLLWTF 201: WRILFPVHAV TFSDFFLADI LTSMSKVLSD LERSVCRMVH RQVATVAWFE ADSVCGSHSA AIPLVLVLPY LFRLFQCIRQ YKDSKDIANI YNAGKYLTAV 301: PVIFLSALKY YIDPDTWTYS IQPAWILSGL ANTFFSFFWD ILRDWDLSVF TRIFKFTRPN LFSHLLYGRR WVYVWVIGSN LVLRWTWTYK LSAHLRNNYI 401: TVFIITALEI YRRFQWAFFR IENVWYKINN PKHTAHQSNP LSLQHDIDSE HEKLLAHSHS PGV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)