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AT3G56840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.887
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : FAD-dependent oxidoreductase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4748 Blast hits to 4741 proteins in 1463 species: Archae - 76; Bacteria - 3210; Metazoa - 112; Fungi - 136; Plants - 47; Viruses - 1; Other Eukaryotes - 1166 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G56840-MONOMEReggNOG:COG0579eggNOG:KOG2665EMBL:AL390921
EMBL:CP002686EnsemblPlants:AT3G56840EnsemblPlants:AT3G56840.1entrez:824851
Gene3D:3.50.50.60GeneID:824851GO:GO:0003973Gramene:AT3G56840.1
hmmpanther:PTHR13847hmmpanther:PTHR13847:SF206HOGENOM:HOG000245179InterPro:IPR006076
InterPro:IPR023753KEGG:ath:AT3G56840OMA:RMRFGPDPfam:PF01266
PhylomeDB:Q9LES4PIR:T51272PRO:PR:Q9LES4Proteomes:UP000006548
Reactome:R-ATH-880009RefSeq:NP_191243.1SMR:Q9LES4STRING:3702.AT3G56840.1
SUPFAM:SSF51905TAIR:AT3G56840UniGene:At.34893UniGene:At.5357
UniGene:At.75281UniGene:At.9843UniProt:Q9LES4
Coordinates (TAIR10) chr3:+:21044317..21046177
Molecular Weight (calculated) 53528.60 Da
IEP (calculated) 9.08
GRAVY (calculated) -0.21
Length 483 amino acids
Sequence (TAIR10)
(BLAST)
001: MKHKPETAAF SLIRPLEAWA ANANKACNTK KMLPCLGRKW MRLSTRNLKP TWNLINVVDA SKTIVRGISG GAETIAKERV DTVVIGAGVV GLAVARELSL
101: RGREVLILDA ASSFGTVTSS RNSEVVHAGI YYPPNSLKAK FCVRGRELLY KYCSEYEIPH KKIGKLIVAT GSSEIPKLDL LMHLGTQNRV SGLRMLEGFE
201: AMRMEPQLRC VKALLSPESG ILDTHSFMLS LVEKSFDFMV YRDNNNLRLQ GEAQNNHATF SYNTVVLNGR VEEKKMHLYV ADTRFSESRC EAEAQLELIP
301: NLVVNSAGLG AQALAKRLHG LDHRFVPSSH YARGCYFTLS GIKAPPFNKL VYPIPEEGGL GVHVTVDLNG LVKFGPDVEW IECTDDTSSF LNKFDYRVNP
401: QRSEKFYPEI RKYYPDLKDG SLEPGYSGIR PKLSGPKQSP ADFVIQGEET HGVPGLVNLF GIESPGLTSS LAIAEHIANK FLR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)