suba logo
AT3G58970.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
mitochondrion 0.779
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : magnesium transporter 6
Curator
Summary (TAIR10)
Transmembrane magnesium transporter. One of nine family members.
Computational
Description (TAIR10)
magnesium transporter 6 (MGT6); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transport 5 (TAIR:AT4G28580.1); Has 803 Blast hits to 784 proteins in 174 species: Archae - 2; Bacteria - 26; Metazoa - 66; Fungi - 194; Plants - 407; Viruses - 2; Other Eukaryotes - 106 (source: NCBI BLink).
Protein Annotations
BioGrid:10381eggNOG:ENOG410XNNZeggNOG:KOG2662EMBL:AL163527
EMBL:AY057613EMBL:AY150289EMBL:BT002266EMBL:CP002686
EnsemblPlants:AT3G58970EnsemblPlants:AT3G58970.1entrez:825066GeneID:825066
Genevisible:Q93ZD7GO:GO:0005886GO:GO:0015095GO:GO:0015693
GO:GO:0016021GO:GO:1903830Gramene:AT3G58970.1hmmpanther:PTHR13890
hmmpanther:PTHR13890:SF2HOGENOM:HOG000238510InParanoid:Q93ZD7InterPro:IPR002523
KEGG:ath:AT3G58970KO:K16075ncoils:CoilOMA:ERDAYPV
PaxDb:Q93ZD7Pfam:PF01544Pfam:Q93ZD7PhylomeDB:Q93ZD7
PIR:T47779PRIDE:Q93ZD7PRO:PR:Q93ZD7ProteinModelPortal:Q93ZD7
Proteomes:UP000006548RefSeq:NP_567076.1STRING:3702.AT3G58970.1SUPFAM:0053126
TAIR:AT3G58970tair10-symbols:MGT6tair10-symbols:MRS2-4TCDB:1.A.35.5.4
TMHMM:TMhelixUniGene:At.49665UniProt:Q93ZD7
Coordinates (TAIR10) chr3:-:21789659..21791163
Molecular Weight (calculated) 48407.20 Da
IEP (calculated) 5.36
GRAVY (calculated) -0.12
Length 436 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKGPLSFRR LSSIRHRKKG SAVKDDSAQT STPSSPPPPL PIHAGGSAVG ATGKAKKKTG GARLWMRFDR TGAMEVVECD KSTIIKRASV PARDLRILGP
101: VFSHSSNILA REKAIVVNLE VIKAIVTAEE VLLLDPLRPE VLPFVERLKQ QFPQRNGNEN ALQASANVQS PLDPEAAEGL QSELPFEFQV LEIALEVVCS
201: FVDKSVAALE TEAWPVLDEL TKNVSTENLE YVRSLKSNLT RLLARVQKVR DELEHLLDDN EDMADLYLTR KWIQNQQTEA ILAGTASNSI ALPAHNTSNL
301: HRLTSNRSAS MVTSNTEEDD VEDLEMLLEA YFMQLDGMRN KILTVREYID DTEDYVNIQL DNQRNELIQL QLTLTIASFA IAAETLLASL FGMNIPCPLY
401: SIHGVFGYFV WSVTALCIVL FMVTLGYARW KKLLGS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)