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AT4G03400.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.544
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Auxin-responsive GH3 family protein
Curator
Summary (TAIR10)
Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.
Computational
Description (TAIR10)
DWARF IN LIGHT 2 (DFL2); INVOLVED IN: response to auxin stimulus, response to light stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT2G46370.4); Has 1425 Blast hits to 1352 proteins in 234 species: Archae - 0; Bacteria - 486; Metazoa - 52; Fungi - 2; Plants - 663; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2617-MONOMEReggNOG:ENOG410IE8CeggNOG:ENOG410XQH0EMBL:AC005275
EMBL:AF071527EMBL:AL161496EMBL:AY059941EMBL:BT000061
EMBL:CP002687EnsemblPlants:AT4G03400EnsemblPlants:AT4G03400.1entrez:827938
GeneID:827938GO:GO:0009416GO:GO:0009507Gramene:AT4G03400.1
hmmpanther:PTHR31901hmmpanther:PTHR31901:SF10IntAct:Q9ZNS2InterPro:IPR004993
KEGG:00220+6.3.2.-KEGG:00261+6.3.2.-KEGG:00380+6.3.2.-KEGG:ath:AT4G03400
KO:K14487OMA:ITLPKMRPANTHER:PTHR31901Pfam:PF03321
PhylomeDB:Q9ZNS2PIR:B85043Proteomes:UP000006548RefSeq:NP_192249.1
SMR:Q9ZNS2STRING:3702.AT4G03400.1TAIR:AT4G03400tair10-symbols:DFL2
tair10-symbols:GH3-10UniGene:At.37575UniGene:At.3945UniProt:Q9ZNS2
Coordinates (TAIR10) chr4:-:1497675..1499729
Molecular Weight (calculated) 66862.80 Da
IEP (calculated) 5.95
GRAVY (calculated) -0.18
Length 591 amino acids
Sequence (TAIR10)
(BLAST)
001: METVEAGHDD VIGWFEHVSE NACKVQSETL RRILELNSGV EYLRKWLGTV DVEKMDDYTL ETLFTSLVPI VSHADLDPYI QRIADGETSP LLTQEPITVL
101: SLSSGTTEGR QKYVPFTRHS AQTTLQIFRL SAAYRSRFYP IREGGRILEF IYAGKEFKTL GGLTVGTATT HYYASEEFKT KQETTKSFTC SPQEVISGGD
201: FGQCTYCHLL LGLHYSSQVE FVASAFSYTI VQAFSFFEEI WREICADIKE GNLSSRITLP KMRKAVLALI RPNPSLASHI EEICLELETN LGWFGLISKL
301: WPNAKFISSI MTGSMLPYLN KLRHYAGGLP LVSADYGSTE SWIGVNVDPH LPPEDVSFAV IPTFSYFEFI PLYRRQNQSD ICIDGDFVED KPVPLSQVKL
401: GQEYELVLTT FTGLYRYRLG DVVEVTSFHK GTPKLSFIYR RKLILTINID KNTEKDLQRV VDKASQLLSR STRAEVVDFT SHADVIARPG HYVIYWEIRG
501: EADDKALEEC CREMDTAFVD YGYVVSRRMN SIGPLELRVV ERGTFGKVAE RCVGKCGGLN QFKTPRCTTN SVMLDILNDS TIKRFRSSAY D
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)