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AT1G78490.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.882
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cytochrome P450, family 708, subfamily A, polypeptide 3
Curator
Summary (TAIR10)
member of CYP708A
Computational
Description (TAIR10)
cytochrome P450, family 708, subfamily A, polypeptide 3 (CYP708A3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 2 (TAIR:AT5G48000.5); Has 30213 Blast hits to 30148 proteins in 1662 species: Archae - 65; Bacteria - 6082; Metazoa - 10392; Fungi - 4958; Plants - 7277; Viruses - 0; Other Eukaryotes - 1439 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G78490-MONOMEReggNOG:COG2124eggNOG:KOG0157EMBL:AY065073
EMBL:BT006609EMBL:CP002684EnsemblPlants:AT1G78490EnsemblPlants:AT1G78490.1
entrez:844185Gene3D:1.10.630.10GeneID:844185GO:GO:0004497
GO:GO:0005506GO:GO:0005783GO:GO:0007275GO:GO:0010268
GO:GO:0016125GO:GO:0016132GO:GO:0016705GO:GO:0020037
Gramene:AT1G78490.1hmmpanther:PTHR24286hmmpanther:PTHR24286:SF37HOGENOM:HOG000237614
InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT1G78490
ncoils:CoilOMA:HIRSIASPfam:PF00067PhylomeDB:Q8VZC2
PRINTS:PR00463PROSITE:PS00086Proteomes:UP000006548Reactome:R-ATH-211916
Reactome:R-ATH-5365859RefSeq:NP_177970.1scanprosite:PS00086SMR:Q8VZC2
STRING:3702.AT1G78490.1SUPFAM:SSF48264TAIR:AT1G78490tair10-symbols:CYP708A3
UniGene:At.19257UniProt:Q8VZC2
Coordinates (TAIR10) chr1:+:29528349..29530391
Molecular Weight (calculated) 54998.00 Da
IEP (calculated) 9.52
GRAVY (calculated) -0.13
Length 479 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSIWNVAML MVALVVVRIS HWLYRWSNPK CPGKLPPGSM GFPIIGETLD FFKPCGVEGI PTFVKKRMIR YGPLFRTNIF GSKTVVSTDP DVIHQIFRQE
101: NTSFELGYPD IFVKVFGKDN LFLKEVFIHK YLQKITMQIL GSEGLKQTML GNMDKATRDH IRSIASQGSF NVRKEVENLV VAYMTPKLIS NLKPETQSKL
201: IDNLNAFNLD WFKSFLRLST WKAVTKALKS REEAIQVMKD VLMMRKETRE KQEDFLNTLL EELEKDGSFF DQGSAINLIF LLAFALREGT SSCTALAVKF
301: ISKDPKVLAE LKREHKAIVD NRKDKEAGVS WEEYRHNMTF TNMVSNEVLR LANTTPLLFR KAVQDVEIKG YTIPAGWIVA VAPSAVHFDP AIYENPFEFN
401: PWRWEGKEMI WGSKTFMAFG YGVRLCVGAE FSRLQMAIFL HHLVAYYDFS MVQDSEIIRS PFHQYTKDLL INISQSPTK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)