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AT1G52400.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Predictors External Curations
SwissProt : endoplasmic reticulum 16381842
TAIR : vacuole 15539469
TAIR : nucleus 14617066
TAIR : plastid 18431481
TAIR : peroxisome 17951448
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:32219438 (2020): cytosol
  • PMID:31871212 (2020): mitochondrion
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30962257 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:30135097 (2018): plastid
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25641898 (2015): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23673981 (2013): plastid
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21311031 (2011): plastid
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:19329564 (2009): peroxisome
  • PMID:18431481 (2008): plastid
  • PMID:17951448 (2007): peroxisome
  • PMID:15574830 (2004): plasma membrane
  • PMID:15539469 (2004): plant-type vacuole
  • PMID:14617066 (2003): nucleus
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta glucosidase 18
Curator
Summary (TAIR10)
encodes a member of glycosyl hydrolase family 1, located in inducible ER bodies which were formed after wounding, required in inducible ER body formation
Computational
Description (TAIR10)
beta glucosidase 18 (BGLU18); FUNCTIONS IN: abscisic acid glucose ester beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, identical protein binding; INVOLVED IN: in 6 processes; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 19 (TAIR:AT3G21370.1); Has 11362 Blast hits to 11017 proteins in 1473 species: Archae - 142; Bacteria - 7866; Metazoa - 708; Fungi - 200; Plants - 1449; Viruses - 0; Other Eukaryotes - 997 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G52400-MONOMERBioCyc:ARA:GQT-1542-MONOMERBioCyc:ARA:GQT-1543-MONOMERBioCyc:MetaCyc:AT1G52400-MONOMER
BioGrid:26895BRENDA:3.2.1.175CAZy:GH1EC:3.2.1.175
eggNOG:COG2723eggNOG:KOG0626EMBL:AC037424EMBL:AF083771
EMBL:AF183827EMBL:AJ251301EMBL:AK222051EMBL:AY039855
EMBL:AY056415EMBL:BT000515EMBL:BT000657EMBL:CP002684
EnsemblPlants:AT1G52400EnsemblPlants:AT1G52400.1EnsemblPlants:AT1G52400.3entrez:841670
ExpressionAtlas:Q9SE50Gene3D:3.20.20.80GeneID:841670Genevisible:Q9SE50
GO:GO:0005634GO:GO:0005773GO:GO:0005777GO:GO:0005783
GO:GO:0005788GO:GO:0005975GO:GO:0008422GO:GO:0009414
GO:GO:0009506GO:GO:0009507GO:GO:0009625GO:GO:0009628
GO:GO:0009651GO:GO:0009687GO:GO:0009737GO:GO:0009738
GO:GO:0009789GO:GO:0010119GO:GO:0010168GO:GO:0030104
GO:GO:0042802GO:GO:0050832GO:GO:0051258GO:GO:0051993
hmmpanther:PTHR10353hmmpanther:PTHR10353:SF37HOGENOM:HOG000088630InParanoid:Q9SE50
InterPro:IPR001360InterPro:IPR013781InterPro:IPR017853InterPro:IPR033132
KEGG:ath:AT1G52400KO:K15748OMA:FHEYGHKPANTHER:PTHR10353
PaxDb:Q9SE50Pfam:PF00232Pfam:Q9SE50PhylomeDB:Q9SE50
PIR:C96564PRIDE:Q9SE50PRINTS:PR00131PRO:PR:Q9SE50
PROSITE:PS00014PROSITE:PS00653ProteinModelPortal:Q9SE50Proteomes:UP000006548
RefSeq:NP_001031175.1RefSeq:NP_001185204.1RefSeq:NP_175649.1scanprosite:PS00653
SMR:Q9SE50STRING:3702.AT1G52400.1SUPFAM:SSF51445SWISS-2DPAGE:Q9SE50
TAIR:AT1G52400tair10-symbols:ATBG1tair10-symbols:BGL1tair10-symbols:BGLU18
TMHMM:TMhelixUniGene:At.24169UniProt:Q9SE50
Coordinates (TAIR10) chr1:+:19515250..19517930
Molecular Weight (calculated) 60462.40 Da
IEP (calculated) 7.23
GRAVY (calculated) -0.51
Length 528 amino acids
Sequence (TAIR10)
(BLAST)
001: MVRFEKVHLV LGLALVLTLV GAPTKAQGPV CGAGLPDKFS RLNFPEGFIW GTATAAFQVE GAVNEGCRGP SMWDTFTKKF PHRCENHNAD VAVDFYHRYK
101: EDIQLMKDLN TDAFRLSIAW PRIFPHGRMS KGISKVGVQF YHDLIDELLK NNIIPLVTVF HWDTPQDLED EYGGFLSGRI VQDFTEYANF TFHEYGHKVK
201: HWITFNEPWV FSRAGYDNGK KAPGRCSPYI PGYGQHCQDG RSGYEAYQVS HNLLLSHAYA VDAFRNCKQC AGGKIGIAHS PAWFEPQDLE HVGGSIERVL
301: DFILGWHLAP TTYGDYPQSM KDRVGHRLPK FTEAEKKLLK GSTDYVGMNY YTSVFAKEIS PDPKSPSWTT DSLVDWDSKS VDGYKIGSKP FNGKLDVYSK
401: GLRYLLKYIK DNYGDPEVII AENGYGEDLG EKHNDVNFGT QDHNRKYYIQ RHLLSMHDAI CKDKVNVTGY FVWSLMDNFE WQDGYKARFG LYYIDFQNNL
501: TRHQKVSGKW YSEFLKPQFP TSKLREEL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)