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AT1G52030.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.969
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : myrosinase-binding protein 2
Curator
Summary (TAIR10)
Similar to myrosinase binding proteins which may be involved in metabolizing glucosinolates and forming defense compounds to protect against herbivory. Also similar to lectins and other agglutinating factors. Expressed only in flowers.
Computational
Description (TAIR10)
myrosinase-binding protein 2 (MBP2); FUNCTIONS IN: sugar binding, thioglucosidase binding; INVOLVED IN: flower development, cell adhesion, response to wounding, defense response; LOCATED IN: thioglucosidase complex; EXPRESSED IN: fruit, flower; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: myrosinase-binding protein 1 (TAIR:AT1G52040.1); Has 60372 Blast hits to 16199 proteins in 1266 species: Archae - 330; Bacteria - 18155; Metazoa - 8870; Fungi - 2973; Plants - 10671; Viruses - 2735; Other Eukaryotes - 16638 (source: NCBI BLink).
Protein Annotations
BioGrid:26857eggNOG:ENOG410IJZZeggNOG:ENOG4111KSNEMBL:AB027252
EMBL:AB032412EMBL:AC006216EMBL:AK221159EMBL:AY039537
EMBL:BT002280EMBL:CP002684EMBL:D85194EnsemblPlants:AT1G52030
EnsemblPlants:AT1G52030.1EnsemblPlants:AT1G52030.2entrez:841632Gene3D:2.100.10.30
GeneID:841632Genevisible:Q9SAV1GO:GO:0006952GO:GO:0007155
GO:GO:0009611GO:GO:0009908GO:GO:0010169GO:GO:0010180
GO:GO:0030246Gramene:AT1G52030.1Gramene:AT1G52030.2hmmpanther:PTHR23244
hmmpanther:PTHR23244:SF208InParanoid:Q9SAV1InterPro:IPR001229KEGG:ath:AT1G52030
OMA:DAIGPHFPaxDb:Q9SAV1Pfam:PF01419Pfam:Q9SAV1
Pfscan:PS51752PhylomeDB:Q9SAV1PIR:A96560PRIDE:Q9SAV1
PRO:PR:Q9SAV1PROSITE:PS51752ProteinModelPortal:Q9SAV1Proteomes:UP000006548
RefSeq:NP_175615.1RefSeq:NP_849794.1SMART:SM00915SMR:Q9SAV1
STRING:3702.AT1G52030.1SUPFAM:SSF51101TAIR:AT1G52030tair10-symbols:F-ATMBP
tair10-symbols:MBP1.2tair10-symbols:MBP2UniGene:At.10569UniGene:At.66888
UniProt:Q9SAV1
Coordinates (TAIR10) chr1:-:19346090..19348282
Molecular Weight (calculated) 68853.00 Da
IEP (calculated) 6.77
GRAVY (calculated) -0.33
Length 642 amino acids
Sequence (TAIR10)
(BLAST)
001: MSEKVGAMGG NKGGAFDDGV FDGVKKVIVG KDFNNVTYIK VEYEKDGKFE IREHGTNRGQ LKEFSVDYPN EYITAVGGSY DTVFGYGSAL IKSLLFKTSY
101: GRTSPILGHT TLLGNPAGKE FMLESKYGGK LLGFHGRSGE ALDAIGPHFF AVNSSLKHFK PQGGNGGSAW DDGAFDGVRK VLVGRNGKFV SYVRFEYAKG
201: ERMVPHAHGK RQEAPQEFVV DYPNEHITSV EGTIDGYLSS LKFTTSKGRT SPVFGNVVGS KFVFEETSFK LVGFCGRSGE AIDALGAHFA PLPAPTPAPA
301: PAPAPAPAPA PSPAPASAPV PAPAPTPAPA PAPPNKVEAL GGNGGTIFDD GAFDHVRKVY IGQGDSGVAY VKFEYRKDGK RETREHGKMT VLGTEEFEVE
401: SDDYITSIEV SVDNVFGFKS EIVTSLVFKT FKGITSQPFG METEKKLELK DGKGGKLVGF HGKASDVLYA LGAYFAPTTN STTPSTPSTS KKLQARGGNG
501: GASWDDGVFD GVRKILVGQG NDGVAFVTFE YNKGSQAILG DRHGKQTLLG TETFELDYPS EYITSVEGYY DKIFGVEAEV VTSLTFKTNK RTSQPFGMTA
601: GEHFELNEDG YKIVGFHGKA GDLVHQIGVH AVPIFTNYRC VF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)