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AT1G34470.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.698
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein of unknown function (DUF803)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G09640.1); Has 1275 Blast hits to 1251 proteins in 224 species: Archae - 0; Bacteria - 101; Metazoa - 420; Fungi - 374; Plants - 269; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).
Protein Annotations
BioGrid:25581eggNOG:ENOG410XNR8eggNOG:KOG2922EMBL:AC023279
EMBL:AC023913EMBL:BT024742EMBL:CP002684EnsemblPlants:AT1G34470
EnsemblPlants:AT1G34470.1entrez:840349GeneID:840349Genevisible:Q9LNK7
GO:GO:0005769GO:GO:0005886GO:GO:0015095GO:GO:0015693
GO:GO:0016021Gramene:AT1G34470.1hmmpanther:PTHR12570hmmpanther:PTHR12570:SF21
HOGENOM:HOG000203962InParanoid:Q9LNK7InterPro:IPR008521KEGG:ath:AT1G34470
OMA:FAIEVMPPANTHER:PTHR12570PaxDb:Q9LNK7Pfam:PF05653
Pfam:Q9LNK7PhylomeDB:Q9LNK7PRIDE:Q9LNK7PRO:PR:Q9LNK7
ProteinModelPortal:Q9LNK7Proteomes:UP000006548RefSeq:NP_564447.1SUPFAM:0043518
TAIR:AT1G34470TMHMM:TMhelixUniGene:At.39729UniProt:Q9LNK7
Coordinates (TAIR10) chr1:+:12604574..12606758
Molecular Weight (calculated) 39799.30 Da
IEP (calculated) 7.84
GRAVY (calculated) 0.59
Length 368 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLSGSWRD AYKGMSSDNI KGLVLALSSS LFIGASFIVK KKGLKRAGAS GLRAGSGGYS YLLEPLWWVG MITMIVGEIA NFAAYAFAPA ILVTPLGALS
101: IIISAALAHV ILHEKLHTFG LLGCVLCVVG SITIVLHAPQ EQEIDSVLQV WNLATEPAFL LYAAAVVGAA IILIVQFVPQ YGQSHVMVYI GVCSLVGSLS
201: VMSVKALGIA LKLTFSGMNQ LIYPQTWVFT LIVLTCVITQ MNYLNKALDT FNTAVVSPIY YVMFTSLTIL ASVIMFKDWD RQDGTQIVTE LCGFVTILSG
301: TFLLHKTKDM VDGSSSLGNL ALRLPKQLED SNGFEQEGIP LTLRRHECTK SPRPMRQFIL PQDGPEAV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)