suba logo
AT2G26100.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plastid 0.602
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:22430844 (2012): Golgi
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Galactosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G53290.1); Has 1374 Blast hits to 1363 proteins in 96 species: Archae - 0; Bacteria - 2; Metazoa - 751; Fungi - 0; Plants - 595; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Protein Annotations
EC:2.4.1.-eggNOG:ENOG410XV5HeggNOG:KOG2288EMBL:BT015706
EMBL:KJ138897EnsemblPlants:AT2G26100EnsemblPlants:AT2G26100.1entrez:817150
ExpressionAtlas:W8PV11GeneID:817150GO:GO:0005794GO:GO:0006486
GO:GO:0008378GO:GO:0016021Gramene:AT2G26100.1hmmpanther:PTHR11214
hmmpanther:PTHR11214:SF85HOGENOM:HOG000238809InterPro:IPR002659KEGG:ath:AT2G26100
OMA:HHEDNRAPANTHER:PTHR11214PaxDb:Q66GS2PaxDb:W8PV11
Pfam:PF01762Pfam:Q66GS2PhylomeDB:W8PV11PIR:T02614
PRO:PR:Q66GS2ProteinModelPortal:W8PV11RefSeq:NP_180179.2STRING:3702.AT2G26100.1
TMHMM:TMhelixUniGene:At.43077UniProt:Q66GS2UniProt:W8PV11
Coordinates (TAIR10) chr2:-:11116212..11118129
Molecular Weight (calculated) 41219.10 Da
IEP (calculated) 8.44
GRAVY (calculated) -0.30
Length 371 amino acids
Sequence (TAIR10)
(BLAST)
001: MPLFSHRFTT ASSSSPASPS YYNKPSSKTH KPNSSSSSYT SSRIHVAIIF FSLVSVFIGV AGTIFALSST GPASVYRCGG SKDTSRVVSA SRKLGGDGGN
101: NGVVVERRKL LGFVGIQTGF DSGDRRTALR STWFPSDPDS LLRLEQATGL AFRFVIGKSK DAKKMAELEK EIKEYRDFVL LDTEEEYIRL PYKTLAFFKA
201: AFKLFEADYY VKADDDIYLR PDRLATLLAN ERLHSQTYIG CMKKGPVITD PKLKWYEKQG NLIGNEYFLH AYGPIYVLSA EIVASLAAAR NGSLRMFNNE
301: DVTIGSWMLA MDVHHEDNRA LCDPHCSPKS IAVWDIPKCS GLCDPESRLK ELHKTDMCSK SPTLPPDDID Q
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)