AT3G17430.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Nucleotide-sugar transporter family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G48230.1); Has 2225 Blast hits to 2218 proteins in 235 species: Archae - 0; Bacteria - 16; Metazoa - 439; Fungi - 391; Plants - 1151; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:5966597..5968962 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41704.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.19 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.66 | ||||||||||||||||||||||||||||||||||||||||
| Length | 375 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAKMINKTLV LTYIYLLIYI ILSSGVILYN KWVLSPKYFN FPLPITLTMI HMGFAGFVAF LLIRVFKVVA PVKMTFEIYA TCVVPISAFF ASSLWFGNTA 101: YLHISVAFIQ MLKALMPVAT FIMAVVCGTD KPRCDVFSNM LLVSVGVVIS SYGEIHFNIV GTVYQVTGIF AEALRLVLTQ VLLQKKGLTL NPITSLYYIA 201: PCSFVFLALP WYVLEKPTME VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN 301: YIKVRDVKAS QPTADSLPDR INKEYKMEKK SSDKFNPNDS VEIPRVGGEV NDEEAPLITS RLSHIGRTQL GNHAA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)