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AT5G67380.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : casein kinase alpha 1
Curator
Summary (TAIR10)
casein kinase II catalytic subunit alpha
Computational
Description (TAIR10)
casein kinase alpha 1 (CKA1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: casein kinase II, alpha chain 2 (TAIR:AT3G50000.1); Has 85531 Blast hits to 84684 proteins in 2530 species: Archae - 70; Bacteria - 9546; Metazoa - 32860; Fungi - 11294; Plants - 14699; Viruses - 299; Other Eukaryotes - 16763 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G67380-MONOMERBioCyc:ARA:GQT-143-MONOMERBioGrid:22115BRENDA:2.7.11.1
EC:2.7.11.1eggNOG:ENOG410XNPPeggNOG:KOG0668EMBL:AB007645
EMBL:AF386966EMBL:AK317345EMBL:AK317458EMBL:BT002141
EMBL:CP002688EMBL:D10246EnsemblPlants:AT5G67380EnsemblPlants:AT5G67380.1
entrez:836873GeneID:836873GO:GO:0004674GO:GO:0005524
hmmpanther:PTHR24054hmmpanther:PTHR24054:SF31HOGENOM:HOG000233021InParanoid:Q08467
IntAct:Q08467InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009
InterPro:IPR017441KEGG:ath:AT5G67380KO:K03097OMA:HYERYTA
PaxDb:Q08467Pfam:PF00069Pfam:Q08467Pfscan:PS50011
PIR:S31098PRIDE:Q08467PRO:PR:Q08467PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q08467Proteomes:UP000006548
Reactome:R-ATH-2514853RefSeq:NP_001032165.1RefSeq:NP_201539.2scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q08467STRING:3702.AT5G67380.1
SUPFAM:SSF56112TAIR:AT5G67380tair10-symbols:ATCKA1tair10-symbols:CKA1
UniGene:At.24323UniProt:Q08467
Coordinates (TAIR10) chr5:-:26881156..26883383
Molecular Weight (calculated) 47642.50 Da
IEP (calculated) 8.12
GRAVY (calculated) -0.28
Length 409 amino acids
Sequence (TAIR10)
(BLAST)
001: MIDTLFFLFF LFFDSPLRRL LLLCAVLALR APTAHSPILR SSIVTPTARA VSEVSGCTTI DPDFLVEISD SNQTRAMSKA RVYTEVNVIR PKDYWDYESL
101: IVQWGEQDDY EVVRKVGRGK YSEVFEGINV NSKEKCIIKI LKPVKKKKIR REIKILQNLC GGPNIVKLLD VVRDQHSKTP SLIFEYVNST DFKVLYPTLT
201: DYDIRYYIYE LLKALDFCHS QGIMHRDVKP HNVMIDHELR KLRLIDWGLA EFYHPGKEYN VRVASRYFKG PELLVDLQDY DYSLDMWSLG CMFAGMIFRK
301: EPFFYGHDNQ DQLVKIAKVL GTDELNAYLN KYQLELDPQL EALVGRHSRK PWSKFINADN QHLVSPEAID FLDKLLRYDH QDRLTAKEAM AHAYFAQVRA
401: AETSRMRSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)