suba logo
AT2G23070.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.723
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:30961429 (2019): nucleus
  • PMID:29104584 (2017): nucleus nuclear matrix nucleolus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22550958 (2012): plastid
  • PMID:22215637 (2012): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase alpha 1 (TAIR:AT5G67380.1); Has 86281 Blast hits to 85416 proteins in 2606 species: Archae - 75; Bacteria - 9731; Metazoa - 33171; Fungi - 11404; Plants - 14646; Viruses - 368; Other Eukaryotes - 16886 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G23070-MONOMERBioGrid:2190EC:2.7.11.1eggNOG:ENOG410XNPP
eggNOG:KOG0668EMBL:AC004401EMBL:AY062631EMBL:AY081478
EMBL:AY536852EMBL:CP002685EnsemblPlants:AT2G23070EnsemblPlants:AT2G23070.1
entrez:816837GeneID:816837Genevisible:O64816GO:GO:0004674
GO:GO:0005524GO:GO:0005829GO:GO:0009507Gramene:AT2G23070.1
hmmpanther:PTHR24054hmmpanther:PTHR24054:SF33HOGENOM:HOG000233021InParanoid:O64816
IntAct:O64816InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009
InterPro:IPR017441iPTMnet:O64816KEGG:ath:AT2G23070KO:K03097
MINT:MINT-8294383ncoils:CoilOMA:AMIFIREPaxDb:O64816
Pfam:O64816Pfam:PF00069Pfscan:PS50011PhylomeDB:O64816
PIR:B84620PRIDE:O64816PRO:PR:O64816PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:O64816Proteomes:UP000006548
Reactome:R-ATH-2514853RefSeq:NP_179889.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:O64816STRING:3702.AT2G23070.1SUPFAM:SSF56112
TAIR:AT2G23070UniGene:At.26849UniProt:O64816
Coordinates (TAIR10) chr2:-:9824162..9826871
Molecular Weight (calculated) 50239.10 Da
IEP (calculated) 9.89
GRAVY (calculated) -0.59
Length 432 amino acids
Sequence (TAIR10)
(BLAST)
001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)