AT1G09380.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.716 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : nodulin MtN21 /EamA-like transporter family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT5G07050.1); Has 5897 Blast hits to 5875 proteins in 1081 species: Archae - 84; Bacteria - 3492; Metazoa - 6; Fungi - 4; Plants - 1243; Viruses - 0; Other Eukaryotes - 1068 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:3026351..3029322 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40660.10 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.31 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.47 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 374 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAKSDMLPFL AMVLVQIGYA GMNITSKMAM EAGMKPLILV AYRQIFATIA TFPVAFFLER KTRPKITLRI LVQVFFCSIT GATGNQVLYF VGLQNSSPTI 101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW 201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL 301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)