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AT1G34420.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.993
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : leucine-rich repeat transmembrane protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G41820.1); Has 146592 Blast hits to 61165 proteins in 1949 species: Archae - 41; Bacteria - 12464; Metazoa - 44749; Fungi - 1974; Plants - 76166; Viruses - 76; Other Eukaryotes - 11122 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G34420-MONOMEReggNOG:COG4886eggNOG:ENOG410IFQ5EMBL:AC023279
EMBL:AC023913EMBL:CP002684EMBL:FJ708646EnsemblPlants:AT1G34420
EnsemblPlants:AT1G34420.1entrez:840345Gene3D:3.80.10.10GeneID:840345
GO:GO:0004672GO:GO:0005524GO:GO:0016021Gramene:AT1G34420.1
hmmpanther:PTHR27000hmmpanther:PTHR27000:SF44HOGENOM:HOG000116551InterPro:IPR000719
InterPro:IPR001245InterPro:IPR001611InterPro:IPR003591InterPro:IPR011009
InterPro:IPR013210InterPro:IPR032675KEGG:ath:AT1G34420ncoils:Coil
OMA:NEPQIGDPfam:PF00560Pfam:PF07714Pfam:PF08263
Pfam:PF13855Pfscan:PS50011Pfscan:PS51257Pfscan:PS51450
PhylomeDB:Q9LNK3PROSITE:PS50011PROSITE:PS51450Proteomes:UP000006548
RefSeq:NP_174702.1SMART:SM00220SMART:SM00369SMR:Q9LNK3
STRING:3702.AT1G34420.1SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112
TAIR:AT1G34420TMHMM:TMhelixUniGene:At.51931UniProt:Q9LNK3
Coordinates (TAIR10) chr1:+:12584587..12587570
Molecular Weight (calculated) 106114.00 Da
IEP (calculated) 7.73
GRAVY (calculated) 0.04
Length 966 amino acids
Sequence (TAIR10)
(BLAST)
001: MFTGVKKMKK IHVPPETGKF MFCLFFSFLS CCHVCFSELS LNQTNTMIEL SSFLNISDWN LPGSERNPCS WNGVLCSLPD NSSVISLSLS NFDLSNSSFL
101: PLVCNLQTLE SLDVSNNRLS SIPEGFVTNC ERLIALKHLN FSTNKFSTSP GFRGFSKLAV LDFSHNVLSG NVGDYGFDGL VQLRSLNLSF NRLTGSVPVH
201: LTKSLEKLEV SDNSLSGTIP EGIKDYQELT LIDLSDNQLN GSIPSSLGNL SKLESLLLSN NYLSGLIPES LSSIQTLRRF AANRNRFTGE IPSGLTKHLE
301: NLDLSFNSLA GSIPGDLLSQ LKLVSVDLSS NQLVGWIPQS ISSSLVRLRL GSNKLTGSVP SVAFESLQLL TYLEMDNNSL TGFIPPSFGN LVSLNLLNLA
401: MNEFTGILPP AFGNLSRLQV IKLQQNKLTG EIPDTIAFLS NLLILNISCN SLSGSIPPSL SQLKRLSNMN LQGNNLNGTI PDNIQNLEDL IELQLGQNQL
501: RGRIPVMPRK LQISLNLSYN LFEGSIPTTL SELDRLEVLD LSNNNFSGEI PNFLSRLMSL TQLILSNNQL TGNIPRFTHN VSVDVRGNPG VKLKTENEVS
601: IQRNPSGKSK LVMIVIFVSL GVLALLTGII TVTVLKFSRR CKGINNMQVD PDEEGSTVLP EVIHGKLLTS NALHRSNINF AKAVEAVAHP EHGLHQTMFW
701: SYYRVVMPSG SSYFIKKLNT RDRVFQQASS EQLEVELEML GKLHHTNVMV PLAYVLYSEG CLLIYDFSHT CTLYEILHNH SSGVVDWTSR YSIAVGIAQG
801: ISYLHGSESS GRDPILLPDL SSKKILLKSL TEPLVGDIEL FKVIDPSKSN SSLSAVAGTI GYIPPEYAYT MRVTMAGNVY SFGVILLELL TGRPAVSEGR
901: DLAKWVQSHS SHQEQQNNIL DLRVSKTSTV ATKQMLRALG VALACINISP GARPKMKTVL RMLTRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)