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AT1G11760.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.991
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
MED32; Has 41 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:22960eggNOG:ENOG410IX3KeggNOG:ENOG4111V2KEMBL:AC007296EMBL:AK228068EMBL:BT004763EMBL:CP002684
EnsemblPlants:AT1G11760EnsemblPlants:AT1G11760.1entrez:837720GeneID:837720GO:GO:0006351GO:GO:0006355GO:GO:0009631
GO:GO:0016592GO:GO:0042542GO:GO:0048364Gramene:AT1G11760.1hmmpanther:PTHR35989hmmpanther:PTHR35989:SF1HOGENOM:HOG000243569
InParanoid:Q84VW5IntAct:Q84VW5InterPro:IPR033244iPTMnet:Q84VW5KEGG:ath:AT1G11760OMA:GQHPEEGPANTHER:PTHR35989:SF1
PaxDb:Q84VW5Pfam:Q84VW5PhylomeDB:Q84VW5PIR:D86251PRIDE:Q84VW5PRO:PR:Q84VW5Proteomes:UP000006548
RefSeq:NP_172641.2STRING:3702.AT1G11760.1TAIR:AT1G11760tair10-symbols:MED32UniGene:At.48180UniProt:Q84VW5
Coordinates (TAIR10) chr1:-:3972356..3972811
Molecular Weight (calculated) 16013.70 Da
IEP (calculated) 4.45
GRAVY (calculated) -0.16
Length 151 amino acids
Sequence (TAIR10)
(BLAST)
001: MDNIVDSLNK AYEKFVLASA GVLESKESAG GQKALLTDTA LENFKEKWEL FRVACDQAEE FVESVKQRIG SECLVDEATG LTTTAAGGQA PAAVTGAATS
101: LPPISAVRLE QMSRAVRWLV LELQRGSGVA PGSVHSSSTG FDSRFSEDST Q
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)