AT2G03070.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : mediator subunit 8 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a subunit of the Mediator complex. Regulates plant defense and flowering. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
mediator subunit 8 (MED8); Has 21670 Blast hits to 11104 proteins in 489 species: Archae - 4; Bacteria - 472; Metazoa - 8306; Fungi - 2813; Plants - 2364; Viruses - 51; Other Eukaryotes - 7660 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:905978..908792 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58160.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.97 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.78 | ||||||||||||||||||||||||||||||||||||||||
| Length | 524 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: METQPQQPPP PPVAEKLNPK LEKELNLESL KTRAVSLAKA IARILEDFDA YGRTNTTPKW QDILGQYSMV NLELFNIVEE VKRVSNAFVV LPKNVNAMNA 101: AILPVMLSSK LLPEMETDDN AKREQLLQGV QSLPIPMQIE RLKARMDMIA AACENAERVL ADTRKAYGFG TRQGPSMLPT MDKGQAAKIQ EQEKMLRDAV 201: NDGKGTQLPP DQRQITTALP PHLADVLIIN DAGKIALPGQ SNNINNQGMM QVSGTQFVGR SAASPSGPNF DNTTSPLPYS NSPRATGMVN VPSPQHQIQQ 301: QQFQQQQQRS KLMQLPQHQQ QQLLAQQQQQ LRQSSMQGLG QSQIPALHDM HGQAQQKFQT SHGQHQMPYS QPMGAHQQFQ ARQLSGGHIQ HSMSQGQLNP 401: AMNRHLNQFS GGANSALFTS AQGSPSSQMI PNMSSMQSQT LVPRMQQFGV SGTNPQRSHS SQMLGDQMFN TSGMMQTQQT QIQQSQQQQQ QQQQGGYGNM 501: QTNQQSLQPN NMMQNAQQRH QNPQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)