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AT4G04750.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.854
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Major facilitator superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G04760.1); Has 35831 Blast hits to 35204 proteins in 2351 species: Archae - 638; Bacteria - 18535; Metazoa - 5452; Fungi - 6963; Plants - 2695; Viruses - 0; Other Eukaryotes - 1548 (source: NCBI BLink).
Protein Annotations
BioGrid:11122eggNOG:ENOG410XNQKeggNOG:KOG0254EMBL:AF118223
EMBL:AK118190EMBL:AL161501EMBL:CP002687EnsemblPlants:AT4G04750
EnsemblPlants:AT4G04750.1entrez:825811GeneID:825811Genevisible:Q8GXK5
GO:GO:0008643GO:GO:0016021GO:GO:0022891hmmpanther:PTHR23500
hmmpanther:PTHR23500:SF62HOGENOM:HOG000202868InParanoid:Q8GXK5InterPro:IPR003663
InterPro:IPR005828InterPro:IPR005829InterPro:IPR020846KEGG:ath:AT4G04750
OMA:YTIWITNPaxDb:Q8GXK5Pfam:PF00083Pfam:Q8GXK5
Pfscan:PS50850PhylomeDB:Q8GXK5PIR:G85059PRIDE:Q8GXK5
PRINTS:PR00171PRO:PR:Q8GXK5PROSITE:PS00217PROSITE:PS50850
ProteinModelPortal:Q8GXK5Proteomes:UP000006548Reactome:R-ATH-428790RefSeq:NP_192384.2
scanprosite:PS00217SMR:Q8GXK5STRING:3702.AT4G04750.1SUPFAM:SSF103473
TAIR:AT4G04750TIGRfam:TIGR00879TIGRFAMs:TIGR00879TMHMM:TMhelix
UniGene:At.33970UniProt:Q8GXK5
Coordinates (TAIR10) chr4:+:2418110..2422624
Molecular Weight (calculated) 51680.30 Da
IEP (calculated) 5.02
GRAVY (calculated) 0.62
Length 482 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEESLLPSH TEDVSASPNK SSSLLSEISN ASTRPFVLAF TVGSCGALSF GCIVGYTAPT QSSIMKDLNL SIADFSFFGS ILTVGLILGA LICGKLADLV
101: GRVYTIWITN ILVLIGWLAI AFAKDVRLLD LGRLLQGISV GISSYLGPIY ISELAPRNLR GAASSLMQLF VGVGLSAFYA LGTAVAWRSL AILGSIPSLV
201: VLPLLFFIPE SPRWLAKVGR EKEVEGVLLS LRGAKSDVSD EAATILEYTK HVEQQDIDSR GFFKLFQRKY ALPLTIGVVL ISMPQLGGLN GYTFYTDTIF
301: TSTGVSSDIG FILTSIVQMT GGVLGVLLVD ISGRRSLLLF SQAGMFLGCL ATAISFFLQK NNCWETGTPI MALISVMVYF GSYGLGMGPI PWIIASEIYP
401: VDVKGAAGTV CNLVTSISSW LVTYSFNFLL QWSSTGTFMM FATVMGLGFV FTAKLVPETK GKSLEEIQSA FTDSTSEDST IF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)