suba logo
AT5G07990.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
endoplasmic reticulum 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cytochrome P450 superfamily protein
Curator
Summary (TAIR10)
Required for flavonoid 3' hydroxylase activity.
Computational
Description (TAIR10)
TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink).
Protein Annotations
BioGrid:15971BRENDA:1.14.13.21EC:1.14.13.21eggNOG:COG2124
eggNOG:KOG0156EMBL:AF155171EMBL:AF241643EMBL:AF241644
EMBL:AF241645EMBL:AF241646EMBL:AF271650EMBL:AF271651
EMBL:AL133421EMBL:CP002688EnsemblPlants:AT5G07990EnsemblPlants:AT5G07990.1
entrez:830693Gene3D:1.10.630.10GeneID:830693Genevisible:Q9SD85
GO:GO:0005506GO:GO:0005789GO:GO:0009733GO:GO:0009813
GO:GO:0016020GO:GO:0016021GO:GO:0016711GO:GO:0020037
GO:GO:0044550Gramene:AT5G07990.1gramene_pathway:1.14.13.21gramene_pathway:PWY-3101
gramene_pathway:PWY-5060gramene_pathway:PWY-5152gramene_pathway:PWY1F-823gramene_plant_reactome:1119322
gramene_plant_reactome:6875469hmmpanther:PTHR24298hmmpanther:PTHR24298:SF104HOGENOM:HOG000218628
InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT5G07990
KO:K05280OMA:HIASESCPaxDb:Q9SD85Pfam:PF00067
Pfam:Q9SD85PhylomeDB:Q9SD85PIR:T45624PRIDE:Q9SD85
PRINTS:PR00385PRINTS:PR00463PRO:PR:Q9SD85PROSITE:PS00086
ProteinModelPortal:Q9SD85Proteomes:UP000006548RefSeq:NP_196416.1scanprosite:PS00086
SMR:Q9SD85STRING:3702.AT5G07990.1SUPFAM:SSF48264TAIR:AT5G07990
tair10-symbols:CYP75B1tair10-symbols:D501tair10-symbols:TT7TMHMM:TMhelix
UniGene:At.12059UniPathway:UPA00154UniProt:Q9SD85
Coordinates (TAIR10) chr5:+:2560437..2562859
Molecular Weight (calculated) 56789.90 Da
IEP (calculated) 8.18
GRAVY (calculated) -0.09
Length 513 amino acids
Sequence (TAIR10)
(BLAST)
001: MATLFLTILL ATVLFLILRI FSHRRNRSHN NRLPPGPNPW PIIGNLPHMG TKPHRTLSAM VTTYGPILHL RLGFVDVVVA ASKSVAEQFL KIHDANFASR
101: PPNSGAKHMA YNYQDLVFAP YGHRWRLLRK ISSVHLFSAK ALEDFKHVRQ EEVGTLTREL VRVGTKPVNL GQLVNMCVVN ALGREMIGRR LFGADADHKA
201: DEFRSMVTEM MALAGVFNIG DFVPSLDWLD LQGVAGKMKR LHKRFDAFLS SILKEHEMNG QDQKHTDMLS TLISLKGTDL DGDGGSLTDT EIKALLLNMF
301: TAGTDTSAST VDWAIAELIR HPDIMVKAQE ELDIVVGRDR PVNESDIAQL PYLQAVIKEN FRLHPPTPLS LPHIASESCE INGYHIPKGS TLLTNIWAIA
401: RDPDQWSDPL AFKPERFLPG GEKSGVDVKG SDFELIPFGA GRRICAGLSL GLRTIQFLTA TLVQGFDWEL AGGVTPEKLN MEESYGLTLQ RAVPLVVHPK
501: PRLAPNVYGL GSG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)