AT1G45191.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.619 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glycosyl hydrolase superfamily protein | ||||||||||||
| Curator Summary (TAIR10) |
beta-glucosidase related protein, similar to beta-glucosidase GI:3820531 from (Pinus contorta); contains Pfam profile: PF00232 Glycosyl hydrolase family 1 | ||||||||||||
| Computational Description (TAIR10) |
Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 2 (TAIR:AT4G22100.1). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:17116044..17119076 | ||||||||||||
| Molecular Weight (calculated) | 59944.00 Da | ||||||||||||
| IEP (calculated) | 6.79 | ||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||
| Length | 529 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEDVLTLITM IVLLLLAFHG FGKCSSDLYS RSDFPEGFVF GAGISAYQWE GAVDEDGRKP SVWDTFLHCR LDCPNFSCVY RGKMDNGDIA CDGYHKYKED 101: VQLMAETGLH TFRFSISWSR LISNGRGSIN PKGLQFYKNF IQELVKHGIE PHVTLHHYDF PQYLEDDYGG WTNRKIIKDF TAYADVCFRE FGNHVKFWTT 201: INEANIFTIG GYNDGNSPPG RCSFPGRNCT LGNSSTETYI VGHNLLLAHA SVSRLYKQKY KDIQGGSVGF SLFAMNFTPS TNSKDDEIAT KRANDFYLGW 301: MLEPLIYGDY PDVMKRTIGS RLPVFSKEES EQVKGSSDFI GVIHYLTALV TNIDINPSLS GIPDFNSDMG ESINILSMRV RISRLPNSDE KCLIFFITLS 401: ILEYIKQSYG NPPVYILENG KTMNQDLELQ QKDTPRIEYL DAYIGAVLKA VRNGSDTRGY FVWSFMDLYE LLNGYKSSFG LYSVNFSDPH RKRSPKLSAH 501: WYSGFLKGKP TFLGSQGITQ LHSNFSSSR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)