AT4G23990.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cellulose synthase like G3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a protein similar to cellulose synthase | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cellulose synthase like G3 (CSLG3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G1 (TAIR:AT4G24010.1); Has 2576 Blast hits to 2006 proteins in 301 species: Archae - 0; Bacteria - 469; Metazoa - 0; Fungi - 15; Plants - 2040; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:12456491..12460498 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 85384.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.86 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 751 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MYQVSLKQFV FLLKIKSTTM EPHRKHSVGD TTLHTCHPCR RTIPYRIYAV FHTCGIIALM YHHVHSLLTA NTTLITSLLL LSDIVLAFMW ATTTSLRYKP 101: VRRTEYPEKY AAEPEDFPKL DVFICTADPY KEPPMMVVNT ALSVMAYEYP SDKISVYVSD DGGSSLTLFA LMEAAKFSKH WLPFCKKNNV QDRSPEVYFS 201: SKLRSRSDEA ENIKMMYEDM KSRVEHVVES GKVETAFITC DQFRGVFDLW TDKFTRHDHP TIIQVLQNSE NDMDDTKKYI MPNLIYVSRE KSKVSSHHFK 301: AGALNTLLRV SGVMTNSPII LTLDCDMYSN DPATPVRALC YLTDPKIKTG LGFVQFPQTF QGISKNDIYA CAYKRLFEIN MIGFDGLMGP NHVGTGCFFN 401: RRGFYGAPSN LILPEIDELK PNRIVDKPIN AQDVLALAHR VAGCIYELNT NWGSKIGFRY GSLVEDYYTG YRLHCEGWRS VFCRPKRAAF CGDSPKSLID 501: VVSQQKRWAI GLLEVAISRY SPITYGVKSM GLVTGVGYCQ YACWAFWSLP LIVYGFLPQL ALLYQSSVFP KSSDPWFWLY IVLFLGAYGQ DLLDFVLEGG 601: TYGGWWNDQR MWSIRGFSSH LFGFIEFTLK TLNLSTHGFN VTSKANDDEE QSKRYEKEIF EFGPSSSMFL PLTTVAIVNL LAFVWGLYGL FAWGEGLVLE 701: LMLASFAVVN CLPIYEAMVL RIDDGKLPKR VCFVAGILTF VLIVSGYVFL K |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)