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AT4G23990.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cellulose synthase like G3
Curator
Summary (TAIR10)
encodes a protein similar to cellulose synthase
Computational
Description (TAIR10)
cellulose synthase like G3 (CSLG3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G1 (TAIR:AT4G24010.1); Has 2576 Blast hits to 2006 proteins in 301 species: Archae - 0; Bacteria - 469; Metazoa - 0; Fungi - 15; Plants - 2040; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G23990-MONOMERCAZy:GT2EC:2.4.1.-eggNOG:COG1215
eggNOG:ENOG410IJF3EMBL:AC002343EMBL:AK226706EMBL:AL078468
EMBL:AL161560EMBL:CP002687EnsemblPlants:AT4G23990EnsemblPlants:AT4G23990.1
entrez:828499ExpressionAtlas:Q0WVN5GeneID:828499Genevisible:Q0WVN5
GO:GO:0000139GO:GO:0016021GO:GO:0016760GO:GO:0030244
GO:GO:0071555Gramene:AT4G23990.1gramene_pathway:2.4.1.12gramene_pathway:PWY-1001
hmmpanther:PTHR13301hmmpanther:PTHR13301:SF51HOGENOM:HOG000241941InParanoid:Q0WVN5
InterPro:IPR005150InterPro:IPR029044iPTMnet:Q0WVN5KEGG:ath:AT4G23990
OMA:NDIYACAPaxDb:Q0WVN5Pfam:PF03552Pfam:Q0WVN5
PhylomeDB:Q0WVN5PIR:T08918PRIDE:Q0WVN5PRO:PR:Q0WVN5
ProteinModelPortal:Q0WVN5Proteomes:UP000006548RefSeq:NP_194130.3SMR:Q0WVN5
STRING:3702.AT4G23990.1SUPFAM:SSF53448TAIR:AT4G23990tair10-symbols:ATCSLG3
tair10-symbols:CSLG3TMHMM:TMhelixUniGene:At.27649UniProt:Q0WVN5
UniProt:W8Q2Y5
Coordinates (TAIR10) chr4:+:12456491..12460498
Molecular Weight (calculated) 85384.40 Da
IEP (calculated) 7.86
GRAVY (calculated) 0.02
Length 751 amino acids
Sequence (TAIR10)
(BLAST)
001: MYQVSLKQFV FLLKIKSTTM EPHRKHSVGD TTLHTCHPCR RTIPYRIYAV FHTCGIIALM YHHVHSLLTA NTTLITSLLL LSDIVLAFMW ATTTSLRYKP
101: VRRTEYPEKY AAEPEDFPKL DVFICTADPY KEPPMMVVNT ALSVMAYEYP SDKISVYVSD DGGSSLTLFA LMEAAKFSKH WLPFCKKNNV QDRSPEVYFS
201: SKLRSRSDEA ENIKMMYEDM KSRVEHVVES GKVETAFITC DQFRGVFDLW TDKFTRHDHP TIIQVLQNSE NDMDDTKKYI MPNLIYVSRE KSKVSSHHFK
301: AGALNTLLRV SGVMTNSPII LTLDCDMYSN DPATPVRALC YLTDPKIKTG LGFVQFPQTF QGISKNDIYA CAYKRLFEIN MIGFDGLMGP NHVGTGCFFN
401: RRGFYGAPSN LILPEIDELK PNRIVDKPIN AQDVLALAHR VAGCIYELNT NWGSKIGFRY GSLVEDYYTG YRLHCEGWRS VFCRPKRAAF CGDSPKSLID
501: VVSQQKRWAI GLLEVAISRY SPITYGVKSM GLVTGVGYCQ YACWAFWSLP LIVYGFLPQL ALLYQSSVFP KSSDPWFWLY IVLFLGAYGQ DLLDFVLEGG
601: TYGGWWNDQR MWSIRGFSSH LFGFIEFTLK TLNLSTHGFN VTSKANDDEE QSKRYEKEIF EFGPSSSMFL PLTTVAIVNL LAFVWGLYGL FAWGEGLVLE
701: LMLASFAVVN CLPIYEAMVL RIDDGKLPKR VCFVAGILTF VLIVSGYVFL K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)