AT2G25790.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich receptor-like protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 153683 Blast hits to 57628 proteins in 1967 species: Archae - 59; Bacteria - 14832; Metazoa - 38909; Fungi - 1966; Plants - 84929; Viruses - 21; Other Eukaryotes - 12967 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:11000631..11004031 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 106454.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.83 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 960 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSTSHHHHHP PYLITTLFFL FLNFSCLHAN ELELLLSFKS SIQDPLKHLS SWSYSSTNDV CLWSGVVCNN ISRVVSLDLS GKNMSGQILT AATFRLPFLQ 101: TINLSNNNLS GPIPHDIFTT SSPSLRYLNL SNNNFSGSIP RGFLPNLYTL DLSNNMFTGE IYNDIGVFSN LRVLDLGGNV LTGHVPGYLG NLSRLEFLTL 201: ASNQLTGGVP VELGKMKNLK WIYLGYNNLS GEIPYQIGGL SSLNHLDLVY NNLSGPIPPS LGDLKKLEYM FLYQNKLSGQ IPPSIFSLQN LISLDFSDNS 301: LSGEIPELVA QMQSLEILHL FSNNLTGKIP EGVTSLPRLK VLQLWSNRFS GGIPANLGKH NNLTVLDLST NNLTGKLPDT LCDSGHLTKL ILFSNSLDSQ 401: IPPSLGMCQS LERVRLQNNG FSGKLPRGFT KLQLVNFLDL SNNNLQGNIN TWDMPQLEML DLSVNKFFGE LPDFSRSKRL KKLDLSRNKI SGVVPQGLMT 501: FPEIMDLDLS ENEITGVIPR ELSSCKNLVN LDLSHNNFTG EIPSSFAEFQ VLSDLDLSCN QLSGEIPKNL GNIESLVQVN ISHNLLHGSL PFTGAFLAIN 601: ATAVEGNIDL CSENSASGLR PCKVVRKRST KSWWLIITST FAAFLAVLVS GFFIVLVFQR THNVLEVKKV EQEDGTKWET QFFDSKFMKS FTVNTILSSL 701: KDQNVLVDKN GVHFVVKEVK KYDSLPEMIS DMRKLSDHKN ILKIVATCRS ETVAYLIHED VEGKRLSQVL SGLSWERRRK IMKGIVEALR FLHCRCSPAV 801: VAGNLSPENI VIDVTDEPRL CLGLPGLLCM DAAYMAPETR EHKEMTSKSD IYGFGILLLH LLTGKCSSSN EDIESGVNGS LVKWARYSYS NCHIDTWIDS 901: SIDTSVHQRE IVHVMNLALK CTAIDPQERP CTNNVLQALE STSSSSSSCT TYLSKILSLA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)