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AT2G25790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:21433285 (2011): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich receptor-like protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 153683 Blast hits to 57628 proteins in 1967 species: Archae - 59; Bacteria - 14832; Metazoa - 38909; Fungi - 1966; Plants - 84929; Viruses - 21; Other Eukaryotes - 12967 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G25790-MONOMERBioGrid:2473eggNOG:COG4886eggNOG:ENOG410IDZT
EMBL:AC005395EMBL:CP002685EMBL:F20108EMBL:FJ708700
EnsemblPlants:AT2G25790EnsemblPlants:AT2G25790.1entrez:817121Gene3D:3.80.10.10
GeneID:817121Genevisible:O82318GO:GO:0004672GO:GO:0005524
GO:GO:0005783GO:GO:0005886GO:GO:0016021Gramene:AT2G25790.1
hmmpanther:PTHR27000hmmpanther:PTHR27000:SF87HOGENOM:HOG000116551InParanoid:O82318
InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591InterPro:IPR011009
InterPro:IPR013210InterPro:IPR032675KEGG:ath:AT2G25790OMA:ARPCASD
PaxDb:O82318Pfam:O82318Pfam:PF00069Pfam:PF00560
Pfam:PF08263Pfam:PF13855Pfscan:PS50011PhylomeDB:O82318
PIR:G84652PRIDE:O82318PRO:PR:O82318PROSITE:PS50011
ProteinModelPortal:O82318Proteomes:UP000006548RefSeq:NP_180150.1SMART:SM00369
SMR:O82318STRING:3702.AT2G25790.1SUPFAM:SSF52047SUPFAM:SSF52058
SUPFAM:SSF56112TAIR:AT2G25790TMHMM:TMhelixUniGene:At.27474
UniProt:O82318
Coordinates (TAIR10) chr2:+:11000631..11004031
Molecular Weight (calculated) 106454.00 Da
IEP (calculated) 6.83
GRAVY (calculated) -0.05
Length 960 amino acids
Sequence (TAIR10)
(BLAST)
001: MSTSHHHHHP PYLITTLFFL FLNFSCLHAN ELELLLSFKS SIQDPLKHLS SWSYSSTNDV CLWSGVVCNN ISRVVSLDLS GKNMSGQILT AATFRLPFLQ
101: TINLSNNNLS GPIPHDIFTT SSPSLRYLNL SNNNFSGSIP RGFLPNLYTL DLSNNMFTGE IYNDIGVFSN LRVLDLGGNV LTGHVPGYLG NLSRLEFLTL
201: ASNQLTGGVP VELGKMKNLK WIYLGYNNLS GEIPYQIGGL SSLNHLDLVY NNLSGPIPPS LGDLKKLEYM FLYQNKLSGQ IPPSIFSLQN LISLDFSDNS
301: LSGEIPELVA QMQSLEILHL FSNNLTGKIP EGVTSLPRLK VLQLWSNRFS GGIPANLGKH NNLTVLDLST NNLTGKLPDT LCDSGHLTKL ILFSNSLDSQ
401: IPPSLGMCQS LERVRLQNNG FSGKLPRGFT KLQLVNFLDL SNNNLQGNIN TWDMPQLEML DLSVNKFFGE LPDFSRSKRL KKLDLSRNKI SGVVPQGLMT
501: FPEIMDLDLS ENEITGVIPR ELSSCKNLVN LDLSHNNFTG EIPSSFAEFQ VLSDLDLSCN QLSGEIPKNL GNIESLVQVN ISHNLLHGSL PFTGAFLAIN
601: ATAVEGNIDL CSENSASGLR PCKVVRKRST KSWWLIITST FAAFLAVLVS GFFIVLVFQR THNVLEVKKV EQEDGTKWET QFFDSKFMKS FTVNTILSSL
701: KDQNVLVDKN GVHFVVKEVK KYDSLPEMIS DMRKLSDHKN ILKIVATCRS ETVAYLIHED VEGKRLSQVL SGLSWERRRK IMKGIVEALR FLHCRCSPAV
801: VAGNLSPENI VIDVTDEPRL CLGLPGLLCM DAAYMAPETR EHKEMTSKSD IYGFGILLLH LLTGKCSSSN EDIESGVNGS LVKWARYSYS NCHIDTWIDS
901: SIDTSVHQRE IVHVMNLALK CTAIDPQERP CTNNVLQALE STSSSSSSCT TYLSKILSLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)