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AT1G77380.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : amino acid permease 3
Curator
Summary (TAIR10)
Amino acid permease which transports basic amino acids.
Computational
Description (TAIR10)
amino acid permease 3 (AAP3); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 2 (TAIR:AT5G09220.1); Has 2346 Blast hits to 2332 proteins in 227 species: Archae - 0; Bacteria - 15; Metazoa - 394; Fungi - 322; Plants - 1373; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink).
Protein Annotations
BioGrid:29293eggNOG:COG0814eggNOG:KOG1303EMBL:AC078898
EMBL:AY085581EMBL:AY099788EMBL:AY128905EMBL:CP002684
EMBL:X77499EnsemblPlants:AT1G77380EnsemblPlants:AT1G77380.1entrez:844074
GeneID:844074Genevisible:Q39134GO:GO:0003333GO:GO:0005886
GO:GO:0015171GO:GO:0015293GO:GO:0015802GO:GO:0016021
GO:GO:0031965Gramene:AT1G77380.1hmmpanther:PTHR22950hmmpanther:PTHR22950:SF205
HOGENOM:HOG000238530InParanoid:Q39134IntAct:Q39134InterPro:IPR013057
KEGG:ath:AT1G77380OMA:CLIITVAPaxDb:Q39134Pfam:PF01490
Pfam:Q39134PhylomeDB:Q39134PIR:H96802PRO:PR:Q39134
ProteinModelPortal:Q39134Proteomes:UP000006548RefSeq:NP_177862.1SMR:Q39134
STRING:3702.AT1G77380.1TAIR:AT1G77380tair10-symbols:AAP3tair10-symbols:ATAAP3
TCDB:2.A.18.2.3TMHMM:TMhelixUniGene:At.5381UniProt:Q39134
Coordinates (TAIR10) chr1:-:29075201..29077252
Molecular Weight (calculated) 52040.00 Da
IEP (calculated) 9.07
GRAVY (calculated) 0.51
Length 476 amino acids
Sequence (TAIR10)
(BLAST)
001: MVQNHQTVLA VDMPQTGGSK YLDDDGKNKR TGSVWTASAH IITAVIGSGV LSLAWATAQL GWLAGPVVML LFSAVTYFTS SLLAACYRSG DPISGKRNYT
101: YMDAVRSNLG GVKVTLCGIV QYLNIFGVAI GYTIASAISM MAIKRSNCFH KSGGKDPCHM NSNPYMIAFG LVQILFSQIP DFDQLWWLSI LAAVMSFTYS
201: SAGLALGIAQ VVVNGKVKGS LTGISIGAVT ETQKIWRTFQ ALGDIAFAYS YSIILIEIQD TVKSPPSEEK TMKKATLVSV SVTTMFYMLC GCMGYAAFGD
301: LSPGNLLTGF GFYNPYWLLD IANAAIVIHL IGAYQVYCQP LFAFIEKQAS IQFPDSEFIA KDIKIPIPGF KPLRLNVFRL IWRTVFVIIT TVISMLLPFF
401: NDVVGLLGAL GFWPLTVYFP VEMYIAQKKI PRWSTRWVCL QVFSLGCLVV SIAAAAGSIA GVLLDLKSYK PFRSEY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)