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AT5G16080.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.788
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : carboxyesterase 17
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
carboxyesterase 17 (CXE17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G68620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G16080-MONOMERBioGrid:16741EC:3.1.1.1eggNOG:COG0657
eggNOG:KOG1515EMBL:AF370327EMBL:AL391145EMBL:AY087623
EMBL:AY113907EMBL:CP002688EnsemblPlants:AT5G16080EnsemblPlants:AT5G16080.1
entrez:831465ESTHER:arath-F1N13.220Gene3D:3.40.50.1820GeneID:831465
Genevisible:Q9LFR7GO:GO:0052689Gramene:AT5G16080.1hmmpanther:PTHR23024
hmmpanther:PTHR23024:SF93HOGENOM:HOG000152323InParanoid:Q9LFR7IntAct:Q9LFR7
InterPro:IPR013094InterPro:IPR029058InterPro:IPR033140KEGG:ath:AT5G16080
MEROPS:S09.A12OMA:SASDAYWPaxDb:Q9LFR7Pfam:PF07859
Pfam:Q9LFR7PhylomeDB:Q9LFR7PIR:T51391PRIDE:Q9LFR7
PRO:PR:Q9LFR7PROSITE:PS01174ProteinModelPortal:Q9LFR7Proteomes:UP000006548
RefSeq:NP_197112.1scanprosite:PS01174SMR:Q9LFR7STRING:3702.AT5G16080.1
SUPFAM:SSF53474TAIR:AT5G16080tair10-symbols:AtCXE17tair10-symbols:CXE17
UniGene:At.20852UniProt:Q9LFR7
Coordinates (TAIR10) chr5:-:5252533..5253567
Molecular Weight (calculated) 37700.10 Da
IEP (calculated) 8.90
GRAVY (calculated) -0.11
Length 344 amino acids
Sequence (TAIR10)
(BLAST)
001: MATISFSHNH QSSDNRRGGS HHHRHGPVVE EIEGLIKVFN DGCVERPPIV PIVSPTIHPS SKATAFDIKL SNDTWTRVYI PDAAAASPSV TLPLLVYFHG
101: GGFCVGSAAW SCYHDFLTSL AVKARCVIVS VNYRLAPEHR LPAAYDDGVN VVSWLVKQQI STGGGYPSWL SKCNLSNVFL AGDSAGANIA YQVAVRIMAS
201: GKYANTLHLK GIILIHPFFG GESRTSSEKQ QHHTKSSALT LSASDAYWRL ALPRGASRDH PWCNPLMSSA GAKLPTTMVF MAEFDILKER NLEMCKVMRS
301: HGKRVEGIVH GGVGHAFHIL DNSSVSRDRI HDMMCRLHNF IHPS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)