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AT1G06830.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.711
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Glutaredoxin family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G30540.1); Has 1028 Blast hits to 1026 proteins in 139 species: Archae - 0; Bacteria - 4; Metazoa - 195; Fungi - 77; Plants - 717; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Protein Annotations
BioGrid:22436eggNOG:COG0695eggNOG:KOG1752EMBL:AC011001
EMBL:AY072366EMBL:AY085047EMBL:AY114614EMBL:CP002684
EMBL:FJ611906EnsemblPlants:AT1G06830EnsemblPlants:AT1G06830.1entrez:837195
Gene3D:3.40.30.10GeneID:837195Genevisible:Q9M9Y9GO:GO:0005737
GO:GO:0009055GO:GO:0015035GO:GO:0045454GO:GO:0046872
GO:GO:0051537Gramene:AT1G06830.1hmmpanther:PTHR10168hmmpanther:PTHR10168:SF57
HOGENOM:HOG000095204InParanoid:Q9M9Y9InterPro:IPR002109InterPro:IPR011905
InterPro:IPR012336KEGG:ath:AT1G06830OMA:GCNAPVPPaxDb:Q9M9Y9
Pfam:PF00462Pfam:Q9M9Y9Pfscan:PS51354PhylomeDB:Q9M9Y9
PIR:B86203PRIDE:Q9M9Y9PRO:PR:Q9M9Y9PROSITE:PS51354
ProteinModelPortal:Q9M9Y9Proteomes:UP000006548RefSeq:NP_172168.1SMR:Q9M9Y9
STRING:3702.AT1G06830.1SUPFAM:SSF52833TAIR:AT1G06830TIGRfam:TIGR02189
TIGRFAMs:TIGR02189UniGene:At.12096UniProt:Q9M9Y9
Coordinates (TAIR10) chr1:+:2097189..2097488
Molecular Weight (calculated) 10890.60 Da
IEP (calculated) 8.21
GRAVY (calculated) 0.20
Length 99 amino acids
Sequence (TAIR10)
(BLAST)
1: MDKVMRMSSE KGVVIFTKSS CCLSYAVQVL FQDLGVNPKI HEIDKDPECR EIEKALMRLG CSKPVPAVFI GGKLVGSTNE VMSMHLSSSL VPLVKPYLC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)