AT2G24580.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 0.953 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : FAD-dependent oxidoreductase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FAD-dependent oxidoreductase family protein; FUNCTIONS IN: sarcosine oxidase activity; INVOLVED IN: tetrahydrofolate metabolic process, oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076), Sarcosine oxidase, monomeric (InterPro:IPR006281); Has 4031 Blast hits to 4005 proteins in 935 species: Archae - 135; Bacteria - 2670; Metazoa - 148; Fungi - 247; Plants - 60; Viruses - 0; Other Eukaryotes - 771 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:10444928..10446178 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45704.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.91 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||
| Length | 416 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEYSDDGRFD VIVVGAGVMG SSAAYQLAKR GQKTLLLEQF DFLHHRGSSH GESRTIRATY PEDYYYSMVS ESTRLWAAAQ SEIGYKVHFP TQQFDMGPAD 101: QQSLLSVVAT CQKHGLAHRV MDSHAVSEHF SGRISIPENW IGVSTELGGI IKPTKAVSMF QTLAIGHGAI LRDNTKVANI KRDGESGEGV IVCTVKGDKF 201: YGKKCIVTAG AWISKLVKTV AGIDFPVEPL ETTVCYWRIK EGHEEKFTID GEFPTFASYG APYVYGTPSL EYPGLIKVAV HGGYWCDPDK RPWGPGVKLE 301: ELKEWIKERF GGMVDSEGPV ATQLCMYSMT PDEDFVIDFL GGEFGRDVVV GGGFSGHGFK MAPAVGRILA DMAMEVEAGG GGVEMKQFSL RRFEDNPKGN 401: AKEYPDQVIL DVPLKH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)