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AT4G29720.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.866
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : polyamine oxidase 5
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
polyamine oxidase 5 (PAO5); FUNCTIONS IN: primary amine oxidase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: LSD1-like 3 (TAIR:AT4G16310.1); Has 3107 Blast hits to 2713 proteins in 458 species: Archae - 2; Bacteria - 686; Metazoa - 1027; Fungi - 508; Plants - 550; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink).
Protein Annotations
BRENDA:1.5.3.17EC:1.5.3.-eggNOG:ENOG410XQW0eggNOG:KOG0685
EMBL:AK118203EMBL:AL079344EMBL:AL161575EMBL:AY085576
EMBL:BT005501EMBL:CP002687EnsemblPlants:AT4G29720EnsemblPlants:AT4G29720.1
entrez:829093Gene3D:3.50.50.60GeneID:829093Genevisible:Q9SU79
GO:GO:0005737GO:GO:0048510GO:GO:1990534Gramene:AT4G29720.1
gramene_pathway:1.5.3.14gramene_pathway:1.5.3.16gramene_pathway:PWY-3981-ARAgramene_pathway:PWY-6441
hmmpanther:PTHR10742hmmpanther:PTHR10742:SF300HOGENOM:HOG000037651InParanoid:Q9SU79
InterPro:IPR002937InterPro:IPR023753KEGG:ath:AT4G29720KO:K12259
OMA:RFVKIPWPaxDb:Q9SU79Pfam:PF01593Pfam:Q9SU79
PhylomeDB:Q9SU79PIR:T09935PRIDE:Q9SU79PRO:PR:Q9SU79
ProteinModelPortal:Q9SU79Proteomes:UP000006548Reactome:R-ATH-141334Reactome:R-ATH-351200
RefSeq:NP_194701.1SMR:Q9SU79STRING:3702.AT4G29720.1SUPFAM:SSF51905
SUPFAM:SSF54373TAIR:AT4G29720tair10-symbols:ATPAO5tair10-symbols:PAO5
UniGene:At.31894UniProt:Q9SU79
Coordinates (TAIR10) chr4:-:14553456..14555057
Molecular Weight (calculated) 58689.60 Da
IEP (calculated) 6.08
GRAVY (calculated) -0.26
Length 533 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKKARIVII GAGMAGLTAA NKLYTSSNNT FELSVVEGGS RIGGRINTSE FSSEKIEMGA TWIHGIGGSP VYRIAKETGS LVSDEPWECM DSTIDKAKTF
101: AEGGFEIEPS IVESISGLFT ALMELAQGKE ISQSDADLSR LAHIYETATR VCSKGSSTSV GSFLKSGFDA YWDSISNGGE EGVKGYGKWS RKSLEEAIFT
201: MFSNTQRTYT SADELSTLDF AAESEYQMFP GEEITIAKGY LSVIHHLASV LPQGVIQLNR KVTKIEWQSN EVKLHFSDGS VVFADHVIVT VSLGVLKAGI
301: ETDAELFSPP LPDFKSDAIR RLGYGVVNKL FVEMSQRKFP SLQLVFDRED SEFRFVKIPW WMRRTATITP IHSNSKVLLS WFAGKEALEL EKLTDEEIKD
401: AVMTTISCLT GKEVKNDTAK PLTNGSLNDD DEAMKITKVL KSKWGSDPLF RGSYSYVAVG SSGDDLDAMA EPLPKINKKV GQVNGHDQAK VHELQVMFAG
501: EATHRTHYST THGAYYSGLR EANRLLKHYK CNF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)