AT1G10660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.691 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 155 Blast hits to 154 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 139; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:3533009..3534781 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36763.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.95 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.39 | ||||||||||||||||||||||||||||||||||||
| Length | 320 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAADTTASSY WLNWRVLLCA LILLAPIVLA AVLIWKYEGK RRRQRESQRE LPGTLFQDEA WTTCFKRIHP LWLLAFRVFS FVAMLTLLIS NVVRDGAGIF 101: YFYTQWTFTL VTLYFGYASV LSVYGCCIYN KEASGNMESY TSIGDTEQGT YRPPIALDGE GNTSKASNRP SEAPARKTAG FWVYIFQILF QTCAGAVVLT 201: DIVFWAIIYP FTKGYKLSFL DVCMHSLNAV FLLGDTSLNS LRFPLFRIAY FVLWSCIFVA YQWIIHAVKN LWWPYQFLDL SSPYAPLWYL GVAVMHIPCF 301: AVFALVIKLK NYLLQQRHNS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)