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AT3G58670.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.657
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein of unknown function (DUF1637)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT2G42670.1); Has 361 Blast hits to 361 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Protein Annotations
EC:1.13.11.20eggNOG:ENOG4111Y3HeggNOG:KOG4281EMBL:AL353032
EMBL:AY050940EMBL:AY084662EMBL:AY142515EMBL:CP002686
EnsemblPlants:AT3G58670EnsemblPlants:AT3G58670.1EnsemblPlants:AT3G58670.2EnsemblPlants:AT3G58670.3
entrez:825036Gene3D:2.60.120.10GeneID:825036Genevisible:Q9LXT4
GO:GO:0005634GO:GO:0005737GO:GO:0009061GO:GO:0017172
GO:GO:0018171GO:GO:0046872GO:GO:0070483Gramene:AT3G58670.1
Gramene:AT3G58670.2Gramene:AT3G58670.3hmmpanther:PTHR22966hmmpanther:PTHR22966:SF9
HOGENOM:HOG000240285IntAct:Q9LXT4InterPro:IPR011051InterPro:IPR012864
InterPro:IPR014710KEGG:ath:AT3G58670KO:K10712OMA:PYSSTHG
PaxDb:Q9LXT4Pfam:PF07847Pfam:Q9LXT4PhylomeDB:Q9LXT4
PIR:T49150PRIDE:Q9LXT4PRO:PR:Q9LXT4ProteinModelPortal:Q9LXT4
Proteomes:UP000006548RefSeq:NP_001078310.1RefSeq:NP_001190128.1RefSeq:NP_191426.1
STRING:3702.AT3G58670.1SUPFAM:SSF51182TAIR:AT3G58670UniProt:Q9LXT4
Coordinates (TAIR10) chr3:-:21703693..21705314
Molecular Weight (calculated) 27224.60 Da
IEP (calculated) 6.67
GRAVY (calculated) -0.38
Length 242 amino acids
Sequence (TAIR10)
(BLAST)
001: MPYFIQRLFN TCKSSLSPNG PVSEEALDKV RNVLEKIKPS DVGLEQEAQL VRNWPGPGNE RNGNHHSLPA IKYLQLHECD SFSIGIFCMP PGSIIPLHNH
101: PGMTVLSKLV YGSMHVKSYD WAEPDQSELD DPLQARPAKL VKDIDMTSPS PATTLYPTTG GNIHCFKAIT HCAIFDILSP PYSSTHGRHC NYFRKSPMLD
201: LPGEIEVMNG EVISNVTWLE EYQPPDNFVI WRVPYRGPVI RK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)